Gene : Cagra.0338s0024 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15288 - SUPPRESSION OF TUMORIGENICITY 5 ST5 Genomic Order:  24
Name:  ? Cagra.0338s0024 Secondary Identifier:  ? PAC:28902977
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0338s0024 0.5kb upstream 0.5kb upstream 6740 true Scaffold338: 110846-117585 Capsella grandiflora
Cagra.0338s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold338: 110846-111345 Capsella grandiflora
Cagra.0338s0024 0.5kb downstream 0.5kb downstream 6740 true Scaffold338: 111346-118085 Capsella grandiflora
Cagra.0338s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold338: 117586-118085 Capsella grandiflora
Cagra.0338s0024 1.0kb upstream 1.0kb upstream 7240 true Scaffold338: 110346-117585 Capsella grandiflora
Cagra.0338s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold338: 110346-111345 Capsella grandiflora
Cagra.0338s0024 1.0kb downstream 1.0kb downstream 7240 true Scaffold338: 111346-118585 Capsella grandiflora
Cagra.0338s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold338: 117586-118585 Capsella grandiflora
Cagra.0338s0024 2.0kb upstream 2.0kb upstream 8240 true Scaffold338: 109346-117585 Capsella grandiflora
Cagra.0338s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold338: 109346-111345 Capsella grandiflora
Cagra.0338s0024 2.0kb downstream 2.0kb downstream 8240 true Scaffold338: 111346-119585 Capsella grandiflora
Cagra.0338s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold338: 117586-119585 Capsella grandiflora
Cagra.0338s0024 5.0kb upstream 5.0kb upstream 11240 true Scaffold338: 106346-117585 Capsella grandiflora
Cagra.0338s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold338: 106346-111345 Capsella grandiflora
Cagra.0338s0024 5.0kb downstream 5.0kb downstream 10069 true Scaffold338: 111346-121414 Capsella grandiflora
Cagra.0338s0024 5.0kb downstream 5.0kb downstream 3829 false Scaffold338: 117586-121414 Capsella grandiflora
Cagra.0338s0024 10.0kb upstream 10.0kb upstream 16240 true Scaffold338: 101346-117585 Capsella grandiflora
Cagra.0338s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold338: 101346-111345 Capsella grandiflora
Cagra.0338s0024 10.0kb downstream 10.0kb downstream 10069 true Scaffold338: 111346-121414 Capsella grandiflora
Cagra.0338s0024 10.0kb downstream 10.0kb downstream 3829 false Scaffold338: 117586-121414 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375891 5261 Brassicaceae View MSA
123829230 5264 Brassicales-Malvales View MSA
124345325 5266 SBM View MSA
124242889 5268 Malvidae View MSA
124069833 5270 Rosid View MSA
123750815 5271 Pentapetalae View MSA
122793034 5272 Eudicot View MSA
122046513 5273 Angiosperm View MSA
121343794 5274 Embryophyte View MSA
123425012 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain