Gene : Cagra.0342s0014 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10623 - MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER Genomic Order:  14
Name:  ? Cagra.0342s0014 Secondary Identifier:  ? PAC:28909939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0014 0.5kb upstream 0.5kb upstream 2298 true Scaffold342: 43422-45719 Capsella grandiflora
Cagra.0342s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 45220-45719 Capsella grandiflora
Cagra.0342s0014 0.5kb downstream 0.5kb downstream 2298 true Scaffold342: 42922-45219 Capsella grandiflora
Cagra.0342s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 42922-43421 Capsella grandiflora
Cagra.0342s0014 1.0kb upstream 1.0kb upstream 2798 true Scaffold342: 43422-46219 Capsella grandiflora
Cagra.0342s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 45220-46219 Capsella grandiflora
Cagra.0342s0014 1.0kb downstream 1.0kb downstream 2798 true Scaffold342: 42422-45219 Capsella grandiflora
Cagra.0342s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 42422-43421 Capsella grandiflora
Cagra.0342s0014 2.0kb upstream 2.0kb upstream 3798 true Scaffold342: 43422-47219 Capsella grandiflora
Cagra.0342s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 45220-47219 Capsella grandiflora
Cagra.0342s0014 2.0kb downstream 2.0kb downstream 3798 true Scaffold342: 41422-45219 Capsella grandiflora
Cagra.0342s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 41422-43421 Capsella grandiflora
Cagra.0342s0014 5.0kb upstream 5.0kb upstream 6798 true Scaffold342: 43422-50219 Capsella grandiflora
Cagra.0342s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 45220-50219 Capsella grandiflora
Cagra.0342s0014 5.0kb downstream 5.0kb downstream 6798 true Scaffold342: 38422-45219 Capsella grandiflora
Cagra.0342s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 38422-43421 Capsella grandiflora
Cagra.0342s0014 10.0kb upstream 10.0kb upstream 11798 true Scaffold342: 43422-55219 Capsella grandiflora
Cagra.0342s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 45220-55219 Capsella grandiflora
Cagra.0342s0014 10.0kb downstream 10.0kb downstream 11798 true Scaffold342: 33422-45219 Capsella grandiflora
Cagra.0342s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 33422-43421 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365946 5261 Brassicaceae View MSA
123832442 5264 Brassicales-Malvales View MSA
124340397 5266 SBM View MSA
124250744 5268 Malvidae View MSA
124060698 5270 Rosid View MSA
123746980 5271 Pentapetalae View MSA
122791454 5272 Eudicot View MSA
122044104 5273 Angiosperm View MSA
121351691 5274 Embryophyte View MSA
123424537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain