Gene : Cagra.0342s0015 C. grandiflora v1.1
Defline:  (1 of 16) PF00069//PF00560//PF08263 - Protein kinase domain (Pkinase) // Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  15
Name:  ? Cagra.0342s0015 Secondary Identifier:  ? PAC:28909918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0015 0.5kb upstream 0.5kb upstream 3471 true Scaffold342: 45755-49225 Capsella grandiflora
Cagra.0342s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 48726-49225 Capsella grandiflora
Cagra.0342s0015 0.5kb downstream 0.5kb downstream 3471 true Scaffold342: 45255-48725 Capsella grandiflora
Cagra.0342s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 45255-45754 Capsella grandiflora
Cagra.0342s0015 1.0kb upstream 1.0kb upstream 3971 true Scaffold342: 45755-49725 Capsella grandiflora
Cagra.0342s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 48726-49725 Capsella grandiflora
Cagra.0342s0015 1.0kb downstream 1.0kb downstream 3971 true Scaffold342: 44755-48725 Capsella grandiflora
Cagra.0342s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 44755-45754 Capsella grandiflora
Cagra.0342s0015 2.0kb upstream 2.0kb upstream 4971 true Scaffold342: 45755-50725 Capsella grandiflora
Cagra.0342s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 48726-50725 Capsella grandiflora
Cagra.0342s0015 2.0kb downstream 2.0kb downstream 4971 true Scaffold342: 43755-48725 Capsella grandiflora
Cagra.0342s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 43755-45754 Capsella grandiflora
Cagra.0342s0015 5.0kb upstream 5.0kb upstream 7971 true Scaffold342: 45755-53725 Capsella grandiflora
Cagra.0342s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 48726-53725 Capsella grandiflora
Cagra.0342s0015 5.0kb downstream 5.0kb downstream 7971 true Scaffold342: 40755-48725 Capsella grandiflora
Cagra.0342s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 40755-45754 Capsella grandiflora
Cagra.0342s0015 10.0kb upstream 10.0kb upstream 12971 true Scaffold342: 45755-58725 Capsella grandiflora
Cagra.0342s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 48726-58725 Capsella grandiflora
Cagra.0342s0015 10.0kb downstream 10.0kb downstream 12971 true Scaffold342: 35755-48725 Capsella grandiflora
Cagra.0342s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 35755-45754 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364636 5261 Brassicaceae View MSA
123838357 5264 Brassicales-Malvales View MSA
124346339 5266 SBM View MSA
124240332 5268 Malvidae View MSA
124070898 5270 Rosid View MSA
123745451 5271 Pentapetalae View MSA
122786314 5272 Eudicot View MSA
122043903 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310208 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain