Gene : Cagra.0342s0040 C. grandiflora v1.1
Defline:  (1 of 4) 2.7.1.25 - Adenylyl-sulfate kinase / APS kinase Genomic Order:  40
Name:  ? Cagra.0342s0040 Secondary Identifier:  ? PAC:28909915
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5340 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0040 0.5kb upstream 0.5kb upstream 2497 true Scaffold342: 145945-148441 Capsella grandiflora
Cagra.0342s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 145945-146444 Capsella grandiflora
Cagra.0342s0040 0.5kb downstream 0.5kb downstream 2497 true Scaffold342: 146445-148941 Capsella grandiflora
Cagra.0342s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 148442-148941 Capsella grandiflora
Cagra.0342s0040 1.0kb upstream 1.0kb upstream 2997 true Scaffold342: 145445-148441 Capsella grandiflora
Cagra.0342s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 145445-146444 Capsella grandiflora
Cagra.0342s0040 1.0kb downstream 1.0kb downstream 2997 true Scaffold342: 146445-149441 Capsella grandiflora
Cagra.0342s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 148442-149441 Capsella grandiflora
Cagra.0342s0040 2.0kb upstream 2.0kb upstream 3997 true Scaffold342: 144445-148441 Capsella grandiflora
Cagra.0342s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 144445-146444 Capsella grandiflora
Cagra.0342s0040 2.0kb downstream 2.0kb downstream 3997 true Scaffold342: 146445-150441 Capsella grandiflora
Cagra.0342s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 148442-150441 Capsella grandiflora
Cagra.0342s0040 5.0kb upstream 5.0kb upstream 6997 true Scaffold342: 141445-148441 Capsella grandiflora
Cagra.0342s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 141445-146444 Capsella grandiflora
Cagra.0342s0040 5.0kb downstream 5.0kb downstream 6997 true Scaffold342: 146445-153441 Capsella grandiflora
Cagra.0342s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 148442-153441 Capsella grandiflora
Cagra.0342s0040 10.0kb upstream 10.0kb upstream 11997 true Scaffold342: 136445-148441 Capsella grandiflora
Cagra.0342s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold342: 136445-146444 Capsella grandiflora
Cagra.0342s0040 10.0kb downstream 10.0kb downstream 11997 true Scaffold342: 146445-158441 Capsella grandiflora
Cagra.0342s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 148442-158441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367477 5261 Brassicaceae View MSA
123799365 5264 Brassicales-Malvales View MSA
124296892 5266 SBM View MSA
124244610 5268 Malvidae View MSA
124072316 5270 Rosid View MSA
123747992 5271 Pentapetalae View MSA
122789606 5272 Eudicot View MSA
122042976 5273 Angiosperm View MSA
121348036 5274 Embryophyte View MSA
123424073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain