Gene : Cagra.0342s0056 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24031:SF301 - ATP-DEPENDENT RNA HELICASE DDX18 Genomic Order:  56
Name:  ? Cagra.0342s0056 Secondary Identifier:  ? PAC:28909890
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0342s0056 0.5kb upstream 0.5kb upstream 3627 true Scaffold342: 190227-193853 Capsella grandiflora
Cagra.0342s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold342: 193354-193853 Capsella grandiflora
Cagra.0342s0056 0.5kb downstream 0.5kb downstream 3627 true Scaffold342: 189727-193353 Capsella grandiflora
Cagra.0342s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold342: 189727-190226 Capsella grandiflora
Cagra.0342s0056 1.0kb upstream 1.0kb upstream 4127 true Scaffold342: 190227-194353 Capsella grandiflora
Cagra.0342s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold342: 193354-194353 Capsella grandiflora
Cagra.0342s0056 1.0kb downstream 1.0kb downstream 4127 true Scaffold342: 189227-193353 Capsella grandiflora
Cagra.0342s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold342: 189227-190226 Capsella grandiflora
Cagra.0342s0056 2.0kb upstream 2.0kb upstream 5127 true Scaffold342: 190227-195353 Capsella grandiflora
Cagra.0342s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold342: 193354-195353 Capsella grandiflora
Cagra.0342s0056 2.0kb downstream 2.0kb downstream 5127 true Scaffold342: 188227-193353 Capsella grandiflora
Cagra.0342s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold342: 188227-190226 Capsella grandiflora
Cagra.0342s0056 5.0kb upstream 5.0kb upstream 8127 true Scaffold342: 190227-198353 Capsella grandiflora
Cagra.0342s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold342: 193354-198353 Capsella grandiflora
Cagra.0342s0056 5.0kb downstream 5.0kb downstream 8127 true Scaffold342: 185227-193353 Capsella grandiflora
Cagra.0342s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold342: 185227-190226 Capsella grandiflora
Cagra.0342s0056 10.0kb upstream 10.0kb upstream 12483 true Scaffold342: 190227-202709 Capsella grandiflora
Cagra.0342s0056 10.0kb upstream 10.0kb upstream 9356 false Scaffold342: 193354-202709 Capsella grandiflora
Cagra.0342s0056 10.0kb downstream 10.0kb downstream 13127 true Scaffold342: 180227-193353 Capsella grandiflora
Cagra.0342s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold342: 180227-190226 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365678 5261 Brassicaceae View MSA
123799013 5264 Brassicales-Malvales View MSA
124296580 5266 SBM View MSA
124148689 5268 Malvidae View MSA
123874638 5270 Rosid View MSA
123738458 5271 Pentapetalae View MSA
122788129 5272 Eudicot View MSA
122047465 5273 Angiosperm View MSA
121344633 5274 Embryophyte View MSA
123424646 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain