Gene : Cagra.0316s0040 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10759//PTHR10759:SF4 - 60S RIBOSOMAL PROTEIN L34 Genomic Order:  40
Name:  ? Cagra.0316s0040 Secondary Identifier:  ? PAC:28915684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0040 0.5kb upstream 0.5kb upstream 2283 true Scaffold316: 156402-158684 Capsella grandiflora
Cagra.0316s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 156402-156901 Capsella grandiflora
Cagra.0316s0040 0.5kb downstream 0.5kb downstream 2283 true Scaffold316: 156902-159184 Capsella grandiflora
Cagra.0316s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 158685-159184 Capsella grandiflora
Cagra.0316s0040 1.0kb upstream 1.0kb upstream 2783 true Scaffold316: 155902-158684 Capsella grandiflora
Cagra.0316s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 155902-156901 Capsella grandiflora
Cagra.0316s0040 1.0kb downstream 1.0kb downstream 2783 true Scaffold316: 156902-159684 Capsella grandiflora
Cagra.0316s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 158685-159684 Capsella grandiflora
Cagra.0316s0040 2.0kb upstream 2.0kb upstream 3783 true Scaffold316: 154902-158684 Capsella grandiflora
Cagra.0316s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 154902-156901 Capsella grandiflora
Cagra.0316s0040 2.0kb downstream 2.0kb downstream 3783 true Scaffold316: 156902-160684 Capsella grandiflora
Cagra.0316s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 158685-160684 Capsella grandiflora
Cagra.0316s0040 5.0kb upstream 5.0kb upstream 6783 true Scaffold316: 151902-158684 Capsella grandiflora
Cagra.0316s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 151902-156901 Capsella grandiflora
Cagra.0316s0040 5.0kb downstream 5.0kb downstream 6783 true Scaffold316: 156902-163684 Capsella grandiflora
Cagra.0316s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 158685-163684 Capsella grandiflora
Cagra.0316s0040 10.0kb upstream 10.0kb upstream 11783 true Scaffold316: 146902-158684 Capsella grandiflora
Cagra.0316s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 146902-156901 Capsella grandiflora
Cagra.0316s0040 10.0kb downstream 10.0kb downstream 11783 true Scaffold316: 156902-168684 Capsella grandiflora
Cagra.0316s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 158685-168684 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367040 5261 Brassicaceae View MSA
123834616 5264 Brassicales-Malvales View MSA
124321955 5266 SBM View MSA
124238631 5268 Malvidae View MSA
124064298 5270 Rosid View MSA
123747656 5271 Pentapetalae View MSA
122792050 5272 Eudicot View MSA
122050255 5273 Angiosperm View MSA
121311827 5274 Embryophyte View MSA
123349068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain