Gene : Cagra.0316s0047 C. grandiflora v1.1
Defline:  (1 of 10) PF07714//PF08263//PF13855 - Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  47
Name:  ? Cagra.0316s0047 Secondary Identifier:  ? PAC:28915615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0047 0.5kb upstream 0.5kb upstream 2681 true Scaffold316: 176118-178798 Capsella grandiflora
Cagra.0316s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 178299-178798 Capsella grandiflora
Cagra.0316s0047 0.5kb downstream 0.5kb downstream 2681 true Scaffold316: 175618-178298 Capsella grandiflora
Cagra.0316s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 175618-176117 Capsella grandiflora
Cagra.0316s0047 1.0kb upstream 1.0kb upstream 3181 true Scaffold316: 176118-179298 Capsella grandiflora
Cagra.0316s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 178299-179298 Capsella grandiflora
Cagra.0316s0047 1.0kb downstream 1.0kb downstream 3181 true Scaffold316: 175118-178298 Capsella grandiflora
Cagra.0316s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 175118-176117 Capsella grandiflora
Cagra.0316s0047 2.0kb upstream 2.0kb upstream 4181 true Scaffold316: 176118-180298 Capsella grandiflora
Cagra.0316s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 178299-180298 Capsella grandiflora
Cagra.0316s0047 2.0kb downstream 2.0kb downstream 4181 true Scaffold316: 174118-178298 Capsella grandiflora
Cagra.0316s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 174118-176117 Capsella grandiflora
Cagra.0316s0047 5.0kb upstream 5.0kb upstream 7181 true Scaffold316: 176118-183298 Capsella grandiflora
Cagra.0316s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 178299-183298 Capsella grandiflora
Cagra.0316s0047 5.0kb downstream 5.0kb downstream 7181 true Scaffold316: 171118-178298 Capsella grandiflora
Cagra.0316s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 171118-176117 Capsella grandiflora
Cagra.0316s0047 10.0kb upstream 10.0kb upstream 12181 true Scaffold316: 176118-188298 Capsella grandiflora
Cagra.0316s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 178299-188298 Capsella grandiflora
Cagra.0316s0047 10.0kb downstream 10.0kb downstream 12181 true Scaffold316: 166118-178298 Capsella grandiflora
Cagra.0316s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 166118-176117 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371878 5261 Brassicaceae View MSA
123840942 5264 Brassicales-Malvales View MSA
124345299 5266 SBM View MSA
124237783 5268 Malvidae View MSA
124074219 5270 Rosid View MSA
123750031 5271 Pentapetalae View MSA
122795322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain