Gene : Cagra.0316s0061 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24067:SF44 - UBIQUITIN-CONJUGATING ENZYME E2 C Genomic Order:  61
Name:  ? Cagra.0316s0061 Secondary Identifier:  ? PAC:28915700
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0061 0.5kb upstream 0.5kb upstream 2257 true Scaffold316: 214675-216931 Capsella grandiflora
Cagra.0316s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 214675-215174 Capsella grandiflora
Cagra.0316s0061 0.5kb downstream 0.5kb downstream 2257 true Scaffold316: 215175-217431 Capsella grandiflora
Cagra.0316s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 216932-217431 Capsella grandiflora
Cagra.0316s0061 1.0kb upstream 1.0kb upstream 2757 true Scaffold316: 214175-216931 Capsella grandiflora
Cagra.0316s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 214175-215174 Capsella grandiflora
Cagra.0316s0061 1.0kb downstream 1.0kb downstream 2757 true Scaffold316: 215175-217931 Capsella grandiflora
Cagra.0316s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 216932-217931 Capsella grandiflora
Cagra.0316s0061 2.0kb upstream 2.0kb upstream 3757 true Scaffold316: 213175-216931 Capsella grandiflora
Cagra.0316s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 213175-215174 Capsella grandiflora
Cagra.0316s0061 2.0kb downstream 2.0kb downstream 3757 true Scaffold316: 215175-218931 Capsella grandiflora
Cagra.0316s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 216932-218931 Capsella grandiflora
Cagra.0316s0061 5.0kb upstream 5.0kb upstream 6757 true Scaffold316: 210175-216931 Capsella grandiflora
Cagra.0316s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 210175-215174 Capsella grandiflora
Cagra.0316s0061 5.0kb downstream 5.0kb downstream 6757 true Scaffold316: 215175-221931 Capsella grandiflora
Cagra.0316s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 216932-221931 Capsella grandiflora
Cagra.0316s0061 10.0kb upstream 10.0kb upstream 11757 true Scaffold316: 205175-216931 Capsella grandiflora
Cagra.0316s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 205175-215174 Capsella grandiflora
Cagra.0316s0061 10.0kb downstream 10.0kb downstream 11757 true Scaffold316: 215175-226931 Capsella grandiflora
Cagra.0316s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 216932-226931 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378746 5261 Brassicaceae View MSA
123838520 5264 Brassicales-Malvales View MSA
124340055 5266 SBM View MSA
124250990 5268 Malvidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain