Gene : Cagra.0316s0066 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  66
Name:  ? Cagra.0316s0066 Secondary Identifier:  ? PAC:28915702
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0066 0.5kb upstream 0.5kb upstream 5953 true Scaffold316: 241526-247478 Capsella grandiflora
Cagra.0316s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 246979-247478 Capsella grandiflora
Cagra.0316s0066 0.5kb downstream 0.5kb downstream 5953 true Scaffold316: 241026-246978 Capsella grandiflora
Cagra.0316s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 241026-241525 Capsella grandiflora
Cagra.0316s0066 1.0kb upstream 1.0kb upstream 6453 true Scaffold316: 241526-247978 Capsella grandiflora
Cagra.0316s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 246979-247978 Capsella grandiflora
Cagra.0316s0066 1.0kb downstream 1.0kb downstream 6453 true Scaffold316: 240526-246978 Capsella grandiflora
Cagra.0316s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 240526-241525 Capsella grandiflora
Cagra.0316s0066 2.0kb upstream 2.0kb upstream 7453 true Scaffold316: 241526-248978 Capsella grandiflora
Cagra.0316s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 246979-248978 Capsella grandiflora
Cagra.0316s0066 2.0kb downstream 2.0kb downstream 7453 true Scaffold316: 239526-246978 Capsella grandiflora
Cagra.0316s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 239526-241525 Capsella grandiflora
Cagra.0316s0066 5.0kb upstream 5.0kb upstream 10453 true Scaffold316: 241526-251978 Capsella grandiflora
Cagra.0316s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 246979-251978 Capsella grandiflora
Cagra.0316s0066 5.0kb downstream 5.0kb downstream 10453 true Scaffold316: 236526-246978 Capsella grandiflora
Cagra.0316s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 236526-241525 Capsella grandiflora
Cagra.0316s0066 10.0kb upstream 10.0kb upstream 15453 true Scaffold316: 241526-256978 Capsella grandiflora
Cagra.0316s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 246979-256978 Capsella grandiflora
Cagra.0316s0066 10.0kb downstream 10.0kb downstream 15453 true Scaffold316: 231526-246978 Capsella grandiflora
Cagra.0316s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 231526-241525 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375458 5261 Brassicaceae View MSA
123838915 5264 Brassicales-Malvales View MSA
124322517 5266 SBM View MSA
124253553 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain