Gene : Cagra.0316s0075 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31060:SF13 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MPN9 Genomic Order:  75
Name:  ? Cagra.0316s0075 Secondary Identifier:  ? PAC:28915697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0075 0.5kb upstream 0.5kb upstream 2788 true Scaffold316: 285332-288119 Capsella grandiflora
Cagra.0316s0075 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 285332-285831 Capsella grandiflora
Cagra.0316s0075 0.5kb downstream 0.5kb downstream 2788 true Scaffold316: 285832-288619 Capsella grandiflora
Cagra.0316s0075 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 288120-288619 Capsella grandiflora
Cagra.0316s0075 1.0kb upstream 1.0kb upstream 3288 true Scaffold316: 284832-288119 Capsella grandiflora
Cagra.0316s0075 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 284832-285831 Capsella grandiflora
Cagra.0316s0075 1.0kb downstream 1.0kb downstream 3288 true Scaffold316: 285832-289119 Capsella grandiflora
Cagra.0316s0075 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 288120-289119 Capsella grandiflora
Cagra.0316s0075 2.0kb upstream 2.0kb upstream 4288 true Scaffold316: 283832-288119 Capsella grandiflora
Cagra.0316s0075 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 283832-285831 Capsella grandiflora
Cagra.0316s0075 2.0kb downstream 2.0kb downstream 4288 true Scaffold316: 285832-290119 Capsella grandiflora
Cagra.0316s0075 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 288120-290119 Capsella grandiflora
Cagra.0316s0075 5.0kb upstream 5.0kb upstream 7288 true Scaffold316: 280832-288119 Capsella grandiflora
Cagra.0316s0075 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 280832-285831 Capsella grandiflora
Cagra.0316s0075 5.0kb downstream 5.0kb downstream 7288 true Scaffold316: 285832-293119 Capsella grandiflora
Cagra.0316s0075 5.0kb downstream 5.0kb downstream 5000 false Scaffold316: 288120-293119 Capsella grandiflora
Cagra.0316s0075 10.0kb upstream 10.0kb upstream 12288 true Scaffold316: 275832-288119 Capsella grandiflora
Cagra.0316s0075 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 275832-285831 Capsella grandiflora
Cagra.0316s0075 10.0kb downstream 10.0kb downstream 12288 true Scaffold316: 285832-298119 Capsella grandiflora
Cagra.0316s0075 10.0kb downstream 10.0kb downstream 10000 false Scaffold316: 288120-298119 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377846 5261 Brassicaceae View MSA
123841091 5264 Brassicales-Malvales View MSA
124338131 5266 SBM View MSA
124243985 5268 Malvidae View MSA
124073333 5270 Rosid View MSA
123750982 5271 Pentapetalae View MSA
122787370 5272 Eudicot View MSA
122050728 5273 Angiosperm View MSA
121345298 5274 Embryophyte View MSA
123380189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain