Gene : Cagra.0316s0083 C. grandiflora v1.1
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  83
Name:  ? Cagra.0316s0083 Secondary Identifier:  ? PAC:28915668
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0316s0083 0.5kb upstream 0.5kb upstream 3373 true Scaffold316: 318525-321897 Capsella grandiflora
Cagra.0316s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold316: 318525-319024 Capsella grandiflora
Cagra.0316s0083 0.5kb downstream 0.5kb downstream 3373 true Scaffold316: 319025-322397 Capsella grandiflora
Cagra.0316s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold316: 321898-322397 Capsella grandiflora
Cagra.0316s0083 1.0kb upstream 1.0kb upstream 3873 true Scaffold316: 318025-321897 Capsella grandiflora
Cagra.0316s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold316: 318025-319024 Capsella grandiflora
Cagra.0316s0083 1.0kb downstream 1.0kb downstream 3873 true Scaffold316: 319025-322897 Capsella grandiflora
Cagra.0316s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold316: 321898-322897 Capsella grandiflora
Cagra.0316s0083 2.0kb upstream 2.0kb upstream 4873 true Scaffold316: 317025-321897 Capsella grandiflora
Cagra.0316s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold316: 317025-319024 Capsella grandiflora
Cagra.0316s0083 2.0kb downstream 2.0kb downstream 4873 true Scaffold316: 319025-323897 Capsella grandiflora
Cagra.0316s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold316: 321898-323897 Capsella grandiflora
Cagra.0316s0083 5.0kb upstream 5.0kb upstream 7873 true Scaffold316: 314025-321897 Capsella grandiflora
Cagra.0316s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold316: 314025-319024 Capsella grandiflora
Cagra.0316s0083 5.0kb downstream 5.0kb downstream 7512 true Scaffold316: 319025-326536 Capsella grandiflora
Cagra.0316s0083 5.0kb downstream 5.0kb downstream 4639 false Scaffold316: 321898-326536 Capsella grandiflora
Cagra.0316s0083 10.0kb upstream 10.0kb upstream 12873 true Scaffold316: 309025-321897 Capsella grandiflora
Cagra.0316s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold316: 309025-319024 Capsella grandiflora
Cagra.0316s0083 10.0kb downstream 10.0kb downstream 7512 true Scaffold316: 319025-326536 Capsella grandiflora
Cagra.0316s0083 10.0kb downstream 10.0kb downstream 4639 false Scaffold316: 321898-326536 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374363 5261 Brassicaceae View MSA
123828546 5264 Brassicales-Malvales View MSA
124338741 5266 SBM View MSA
124247811 5268 Malvidae View MSA
124071216 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain