Gene : Cagra.0334s0002 C. grandiflora v1.1
Defline:  (1 of 1) KOG2780 - Ribosome biogenesis protein RPF1, contains IMP4 domain Genomic Order:  2
Name:  ? Cagra.0334s0002 Secondary Identifier:  ? PAC:28906518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0334s0002 0.5kb upstream 0.5kb upstream 2605 true Scaffold334: 10005-12609 Capsella grandiflora
Cagra.0334s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold334: 12110-12609 Capsella grandiflora
Cagra.0334s0002 0.5kb downstream 0.5kb downstream 2605 true Scaffold334: 9505-12109 Capsella grandiflora
Cagra.0334s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold334: 9505-10004 Capsella grandiflora
Cagra.0334s0002 1.0kb upstream 1.0kb upstream 3105 true Scaffold334: 10005-13109 Capsella grandiflora
Cagra.0334s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold334: 12110-13109 Capsella grandiflora
Cagra.0334s0002 1.0kb downstream 1.0kb downstream 3105 true Scaffold334: 9005-12109 Capsella grandiflora
Cagra.0334s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold334: 9005-10004 Capsella grandiflora
Cagra.0334s0002 2.0kb upstream 2.0kb upstream 4105 true Scaffold334: 10005-14109 Capsella grandiflora
Cagra.0334s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold334: 12110-14109 Capsella grandiflora
Cagra.0334s0002 2.0kb downstream 2.0kb downstream 4105 true Scaffold334: 8005-12109 Capsella grandiflora
Cagra.0334s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold334: 8005-10004 Capsella grandiflora
Cagra.0334s0002 5.0kb upstream 5.0kb upstream 7105 true Scaffold334: 10005-17109 Capsella grandiflora
Cagra.0334s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold334: 12110-17109 Capsella grandiflora
Cagra.0334s0002 5.0kb downstream 5.0kb downstream 7105 true Scaffold334: 5005-12109 Capsella grandiflora
Cagra.0334s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold334: 5005-10004 Capsella grandiflora
Cagra.0334s0002 10.0kb upstream 10.0kb upstream 12105 true Scaffold334: 10005-22109 Capsella grandiflora
Cagra.0334s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold334: 12110-22109 Capsella grandiflora
Cagra.0334s0002 10.0kb downstream 10.0kb downstream 12105 true Scaffold334: 5-12109 Capsella grandiflora
Cagra.0334s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold334: 5-10004 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362507 5261 Brassicaceae View MSA
123833516 5264 Brassicales-Malvales View MSA
124336710 5266 SBM View MSA
124238682 5268 Malvidae View MSA
124063799 5270 Rosid View MSA
123738060 5271 Pentapetalae View MSA
122790896 5272 Eudicot View MSA
122041933 5273 Angiosperm View MSA
121347533 5274 Embryophyte View MSA
123426591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain