Gene : Cagra.0334s0001 C. grandiflora v1.1
Defline:  (1 of 9) PTHR31989:SF5 - F11O4.3-RELATED Genomic Order:  1
Name:  ? Cagra.0334s0001 Secondary Identifier:  ? PAC:28906494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0334s0001 0.5kb upstream 0.5kb upstream 2629 true Scaffold334: 6211-8839 Capsella grandiflora
Cagra.0334s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold334: 8340-8839 Capsella grandiflora
Cagra.0334s0001 0.5kb downstream 0.5kb downstream 2629 true Scaffold334: 5711-8339 Capsella grandiflora
Cagra.0334s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold334: 5711-6210 Capsella grandiflora
Cagra.0334s0001 1.0kb upstream 1.0kb upstream 3129 true Scaffold334: 6211-9339 Capsella grandiflora
Cagra.0334s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold334: 8340-9339 Capsella grandiflora
Cagra.0334s0001 1.0kb downstream 1.0kb downstream 3129 true Scaffold334: 5211-8339 Capsella grandiflora
Cagra.0334s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold334: 5211-6210 Capsella grandiflora
Cagra.0334s0001 2.0kb upstream 2.0kb upstream 4129 true Scaffold334: 6211-10339 Capsella grandiflora
Cagra.0334s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold334: 8340-10339 Capsella grandiflora
Cagra.0334s0001 2.0kb downstream 2.0kb downstream 4129 true Scaffold334: 4211-8339 Capsella grandiflora
Cagra.0334s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold334: 4211-6210 Capsella grandiflora
Cagra.0334s0001 5.0kb upstream 5.0kb upstream 7129 true Scaffold334: 6211-13339 Capsella grandiflora
Cagra.0334s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold334: 8340-13339 Capsella grandiflora
Cagra.0334s0001 5.0kb downstream 5.0kb downstream 7129 true Scaffold334: 1211-8339 Capsella grandiflora
Cagra.0334s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold334: 1211-6210 Capsella grandiflora
Cagra.0334s0001 10.0kb upstream 10.0kb upstream 12129 true Scaffold334: 6211-18339 Capsella grandiflora
Cagra.0334s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold334: 8340-18339 Capsella grandiflora
Cagra.0334s0001 10.0kb downstream 10.0kb downstream 8339 true Scaffold334: 1-8339 Capsella grandiflora
Cagra.0334s0001 10.0kb downstream 10.0kb downstream 6210 false Scaffold334: 1-6210 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378093 5261 Brassicaceae View MSA
123827411 5264 Brassicales-Malvales View MSA
124321461 5266 SBM View MSA
124169034 5268 Malvidae View MSA
124075044 5270 Rosid View MSA
123749047 5271 Pentapetalae View MSA
122793392 5272 Eudicot View MSA
122049094 5273 Angiosperm View MSA
121351557 5274 Embryophyte View MSA
123382224 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain