Gene : Cagra.0334s0007 C. grandiflora v1.1
Defline:  (1 of 2) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  7
Name:  ? Cagra.0334s0007 Secondary Identifier:  ? PAC:28906515
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0334s0007 0.5kb upstream 0.5kb upstream 2816 true Scaffold334: 25057-27872 Capsella grandiflora
Cagra.0334s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold334: 25057-25556 Capsella grandiflora
Cagra.0334s0007 0.5kb downstream 0.5kb downstream 2816 true Scaffold334: 25557-28372 Capsella grandiflora
Cagra.0334s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold334: 27873-28372 Capsella grandiflora
Cagra.0334s0007 1.0kb upstream 1.0kb upstream 3316 true Scaffold334: 24557-27872 Capsella grandiflora
Cagra.0334s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold334: 24557-25556 Capsella grandiflora
Cagra.0334s0007 1.0kb downstream 1.0kb downstream 3316 true Scaffold334: 25557-28872 Capsella grandiflora
Cagra.0334s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold334: 27873-28872 Capsella grandiflora
Cagra.0334s0007 2.0kb upstream 2.0kb upstream 4316 true Scaffold334: 23557-27872 Capsella grandiflora
Cagra.0334s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold334: 23557-25556 Capsella grandiflora
Cagra.0334s0007 2.0kb downstream 2.0kb downstream 4316 true Scaffold334: 25557-29872 Capsella grandiflora
Cagra.0334s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold334: 27873-29872 Capsella grandiflora
Cagra.0334s0007 5.0kb upstream 5.0kb upstream 7316 true Scaffold334: 20557-27872 Capsella grandiflora
Cagra.0334s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold334: 20557-25556 Capsella grandiflora
Cagra.0334s0007 5.0kb downstream 5.0kb downstream 7316 true Scaffold334: 25557-32872 Capsella grandiflora
Cagra.0334s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold334: 27873-32872 Capsella grandiflora
Cagra.0334s0007 10.0kb upstream 10.0kb upstream 12316 true Scaffold334: 15557-27872 Capsella grandiflora
Cagra.0334s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold334: 15557-25556 Capsella grandiflora
Cagra.0334s0007 10.0kb downstream 10.0kb downstream 12316 true Scaffold334: 25557-37872 Capsella grandiflora
Cagra.0334s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold334: 27873-37872 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368081 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain