Gene : Cagra.0334s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11964:SF18 - S-ADENOSYLMETHIONINE SYNTHASE 2 Genomic Order:  23
Name:  ? Cagra.0334s0023 Secondary Identifier:  ? PAC:28906497
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ETHYL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5041 Capsella grandiflora pathologic  
Cgrandiflora PWY-7270 Capsella grandiflora pathologic  
Cgrandiflora PWY-7528 Capsella grandiflora pathologic  
Cgrandiflora SAM-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0334s0023 0.5kb upstream 0.5kb upstream 2885 true Scaffold334: 105165-108049 Capsella grandiflora
Cagra.0334s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold334: 107550-108049 Capsella grandiflora
Cagra.0334s0023 0.5kb downstream 0.5kb downstream 2885 true Scaffold334: 104665-107549 Capsella grandiflora
Cagra.0334s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold334: 104665-105164 Capsella grandiflora
Cagra.0334s0023 1.0kb upstream 1.0kb upstream 3385 true Scaffold334: 105165-108549 Capsella grandiflora
Cagra.0334s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold334: 107550-108549 Capsella grandiflora
Cagra.0334s0023 1.0kb downstream 1.0kb downstream 3385 true Scaffold334: 104165-107549 Capsella grandiflora
Cagra.0334s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold334: 104165-105164 Capsella grandiflora
Cagra.0334s0023 2.0kb upstream 2.0kb upstream 4385 true Scaffold334: 105165-109549 Capsella grandiflora
Cagra.0334s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold334: 107550-109549 Capsella grandiflora
Cagra.0334s0023 2.0kb downstream 2.0kb downstream 4385 true Scaffold334: 103165-107549 Capsella grandiflora
Cagra.0334s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold334: 103165-105164 Capsella grandiflora
Cagra.0334s0023 5.0kb upstream 5.0kb upstream 7385 true Scaffold334: 105165-112549 Capsella grandiflora
Cagra.0334s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold334: 107550-112549 Capsella grandiflora
Cagra.0334s0023 5.0kb downstream 5.0kb downstream 7385 true Scaffold334: 100165-107549 Capsella grandiflora
Cagra.0334s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold334: 100165-105164 Capsella grandiflora
Cagra.0334s0023 10.0kb upstream 10.0kb upstream 12385 true Scaffold334: 105165-117549 Capsella grandiflora
Cagra.0334s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold334: 107550-117549 Capsella grandiflora
Cagra.0334s0023 10.0kb downstream 10.0kb downstream 12385 true Scaffold334: 95165-107549 Capsella grandiflora
Cagra.0334s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold334: 95165-105164 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366161 5261 Brassicaceae View MSA
123837532 5264 Brassicales-Malvales View MSA
124340707 5266 SBM View MSA
124247554 5268 Malvidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain