Gene : Cagra.0334s0027 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33824:SF3 - POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED Genomic Order:  27
Name:  ? Cagra.0334s0027 Secondary Identifier:  ? PAC:28906498
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0334s0027 0.5kb upstream 0.5kb upstream 2092 true Scaffold334: 122035-124126 Capsella grandiflora
Cagra.0334s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold334: 122035-122534 Capsella grandiflora
Cagra.0334s0027 0.5kb downstream 0.5kb downstream 2092 true Scaffold334: 122535-124626 Capsella grandiflora
Cagra.0334s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold334: 124127-124626 Capsella grandiflora
Cagra.0334s0027 1.0kb upstream 1.0kb upstream 2592 true Scaffold334: 121535-124126 Capsella grandiflora
Cagra.0334s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold334: 121535-122534 Capsella grandiflora
Cagra.0334s0027 1.0kb downstream 1.0kb downstream 2592 true Scaffold334: 122535-125126 Capsella grandiflora
Cagra.0334s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold334: 124127-125126 Capsella grandiflora
Cagra.0334s0027 2.0kb upstream 2.0kb upstream 3592 true Scaffold334: 120535-124126 Capsella grandiflora
Cagra.0334s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold334: 120535-122534 Capsella grandiflora
Cagra.0334s0027 2.0kb downstream 2.0kb downstream 3592 true Scaffold334: 122535-126126 Capsella grandiflora
Cagra.0334s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold334: 124127-126126 Capsella grandiflora
Cagra.0334s0027 5.0kb upstream 5.0kb upstream 6592 true Scaffold334: 117535-124126 Capsella grandiflora
Cagra.0334s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold334: 117535-122534 Capsella grandiflora
Cagra.0334s0027 5.0kb downstream 5.0kb downstream 6592 true Scaffold334: 122535-129126 Capsella grandiflora
Cagra.0334s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold334: 124127-129126 Capsella grandiflora
Cagra.0334s0027 10.0kb upstream 10.0kb upstream 11592 true Scaffold334: 112535-124126 Capsella grandiflora
Cagra.0334s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold334: 112535-122534 Capsella grandiflora
Cagra.0334s0027 10.0kb downstream 10.0kb downstream 11592 true Scaffold334: 122535-134126 Capsella grandiflora
Cagra.0334s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold334: 124127-134126 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510369 5273 Angiosperm View MSA
122362808 5261 Brassicaceae View MSA
123798432 5264 Brassicales-Malvales View MSA
124296067 5266 SBM View MSA
124148330 5268 Malvidae View MSA
123874346 5270 Rosid View MSA
123458335 5271 Pentapetalae View MSA
122493741 5272 Eudicot View MSA
120783471 5274 Embryophyte View MSA
123427878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain