Gene : Cagra.0338s0007 C. grandiflora v1.1
Defline:  (1 of 48) PF14365 - Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  7
Name:  ? Cagra.0338s0007 Secondary Identifier:  ? PAC:28902968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0338s0007 0.5kb upstream 0.5kb upstream 3123 true Scaffold338: 35216-38338 Capsella grandiflora
Cagra.0338s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold338: 35216-35715 Capsella grandiflora
Cagra.0338s0007 0.5kb downstream 0.5kb downstream 3123 true Scaffold338: 35716-38838 Capsella grandiflora
Cagra.0338s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold338: 38339-38838 Capsella grandiflora
Cagra.0338s0007 1.0kb upstream 1.0kb upstream 3623 true Scaffold338: 34716-38338 Capsella grandiflora
Cagra.0338s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold338: 34716-35715 Capsella grandiflora
Cagra.0338s0007 1.0kb downstream 1.0kb downstream 3623 true Scaffold338: 35716-39338 Capsella grandiflora
Cagra.0338s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold338: 38339-39338 Capsella grandiflora
Cagra.0338s0007 2.0kb upstream 2.0kb upstream 4623 true Scaffold338: 33716-38338 Capsella grandiflora
Cagra.0338s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold338: 33716-35715 Capsella grandiflora
Cagra.0338s0007 2.0kb downstream 2.0kb downstream 4623 true Scaffold338: 35716-40338 Capsella grandiflora
Cagra.0338s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold338: 38339-40338 Capsella grandiflora
Cagra.0338s0007 5.0kb upstream 5.0kb upstream 7623 true Scaffold338: 30716-38338 Capsella grandiflora
Cagra.0338s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold338: 30716-35715 Capsella grandiflora
Cagra.0338s0007 5.0kb downstream 5.0kb downstream 7623 true Scaffold338: 35716-43338 Capsella grandiflora
Cagra.0338s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold338: 38339-43338 Capsella grandiflora
Cagra.0338s0007 10.0kb upstream 10.0kb upstream 12623 true Scaffold338: 25716-38338 Capsella grandiflora
Cagra.0338s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold338: 25716-35715 Capsella grandiflora
Cagra.0338s0007 10.0kb downstream 10.0kb downstream 12623 true Scaffold338: 35716-48338 Capsella grandiflora
Cagra.0338s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold338: 38339-48338 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375763 5261 Brassicaceae View MSA
123838351 5264 Brassicales-Malvales View MSA
124350658 5266 SBM View MSA
124181106 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain