Gene : Cagra.0568s0073 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11206:SF140 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  73
Name:  ? Cagra.0568s0073 Secondary Identifier:  ? PAC:28910919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0073 0.5kb upstream 0.5kb upstream 4217 true Scaffold568: 232806-237022 Capsella grandiflora
Cagra.0568s0073 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 236523-237022 Capsella grandiflora
Cagra.0568s0073 0.5kb downstream 0.5kb downstream 4217 true Scaffold568: 232306-236522 Capsella grandiflora
Cagra.0568s0073 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 232306-232805 Capsella grandiflora
Cagra.0568s0073 1.0kb upstream 1.0kb upstream 4717 true Scaffold568: 232806-237522 Capsella grandiflora
Cagra.0568s0073 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 236523-237522 Capsella grandiflora
Cagra.0568s0073 1.0kb downstream 1.0kb downstream 4717 true Scaffold568: 231806-236522 Capsella grandiflora
Cagra.0568s0073 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 231806-232805 Capsella grandiflora
Cagra.0568s0073 2.0kb upstream 2.0kb upstream 5717 true Scaffold568: 232806-238522 Capsella grandiflora
Cagra.0568s0073 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 236523-238522 Capsella grandiflora
Cagra.0568s0073 2.0kb downstream 2.0kb downstream 5717 true Scaffold568: 230806-236522 Capsella grandiflora
Cagra.0568s0073 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 230806-232805 Capsella grandiflora
Cagra.0568s0073 5.0kb upstream 5.0kb upstream 8717 true Scaffold568: 232806-241522 Capsella grandiflora
Cagra.0568s0073 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 236523-241522 Capsella grandiflora
Cagra.0568s0073 5.0kb downstream 5.0kb downstream 8717 true Scaffold568: 227806-236522 Capsella grandiflora
Cagra.0568s0073 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 227806-232805 Capsella grandiflora
Cagra.0568s0073 10.0kb upstream 10.0kb upstream 13717 true Scaffold568: 232806-246522 Capsella grandiflora
Cagra.0568s0073 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 236523-246522 Capsella grandiflora
Cagra.0568s0073 10.0kb downstream 10.0kb downstream 13717 true Scaffold568: 222806-236522 Capsella grandiflora
Cagra.0568s0073 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 222806-232805 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364738 5261 Brassicaceae View MSA
123798818 5264 Brassicales-Malvales View MSA
124296406 5266 SBM View MSA
124251787 5268 Malvidae View MSA
124071772 5270 Rosid View MSA
123747983 5271 Pentapetalae View MSA
122786922 5272 Eudicot View MSA
122050249 5273 Angiosperm View MSA
121311823 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain