Gene : Cagra.0568s0103 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10146 - PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN Genomic Order:  103
Name:  ? Cagra.0568s0103 Secondary Identifier:  ? PAC:28911029
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0103 0.5kb upstream 0.5kb upstream 2366 true Scaffold568: 337274-339639 Capsella grandiflora
Cagra.0568s0103 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 337274-337773 Capsella grandiflora
Cagra.0568s0103 0.5kb downstream 0.5kb downstream 2366 true Scaffold568: 337774-340139 Capsella grandiflora
Cagra.0568s0103 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 339640-340139 Capsella grandiflora
Cagra.0568s0103 1.0kb upstream 1.0kb upstream 2866 true Scaffold568: 336774-339639 Capsella grandiflora
Cagra.0568s0103 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 336774-337773 Capsella grandiflora
Cagra.0568s0103 1.0kb downstream 1.0kb downstream 2866 true Scaffold568: 337774-340639 Capsella grandiflora
Cagra.0568s0103 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 339640-340639 Capsella grandiflora
Cagra.0568s0103 2.0kb upstream 2.0kb upstream 3866 true Scaffold568: 335774-339639 Capsella grandiflora
Cagra.0568s0103 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 335774-337773 Capsella grandiflora
Cagra.0568s0103 2.0kb downstream 2.0kb downstream 3866 true Scaffold568: 337774-341639 Capsella grandiflora
Cagra.0568s0103 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 339640-341639 Capsella grandiflora
Cagra.0568s0103 5.0kb upstream 5.0kb upstream 6866 true Scaffold568: 332774-339639 Capsella grandiflora
Cagra.0568s0103 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 332774-337773 Capsella grandiflora
Cagra.0568s0103 5.0kb downstream 5.0kb downstream 6866 true Scaffold568: 337774-344639 Capsella grandiflora
Cagra.0568s0103 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 339640-344639 Capsella grandiflora
Cagra.0568s0103 10.0kb upstream 10.0kb upstream 11866 true Scaffold568: 327774-339639 Capsella grandiflora
Cagra.0568s0103 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 327774-337773 Capsella grandiflora
Cagra.0568s0103 10.0kb downstream 10.0kb downstream 11866 true Scaffold568: 337774-349639 Capsella grandiflora
Cagra.0568s0103 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 339640-349639 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371182 5261 Brassicaceae View MSA
123834586 5264 Brassicales-Malvales View MSA
124343996 5266 SBM View MSA
124240066 5268 Malvidae View MSA
124066747 5270 Rosid View MSA
123741353 5271 Pentapetalae View MSA
122795077 5272 Eudicot View MSA
122042316 5273 Angiosperm View MSA
121344237 5274 Embryophyte View MSA
123424021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain