Gene : Cagra.0568s0114 C. grandiflora v1.1
Defline:  (1 of 1) 3.7.1.2 - Fumarylacetoacetase / Fumarylacetoacetate hydrolase Genomic Order:  114
Name:  ? Cagra.0568s0114 Secondary Identifier:  ? PAC:28910914
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TYRFUMCAT-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0114 0.5kb upstream 0.5kb upstream 3483 true Scaffold568: 377650-381132 Capsella grandiflora
Cagra.0568s0114 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 377650-378149 Capsella grandiflora
Cagra.0568s0114 0.5kb downstream 0.5kb downstream 3483 true Scaffold568: 378150-381632 Capsella grandiflora
Cagra.0568s0114 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 381133-381632 Capsella grandiflora
Cagra.0568s0114 1.0kb upstream 1.0kb upstream 3983 true Scaffold568: 377150-381132 Capsella grandiflora
Cagra.0568s0114 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 377150-378149 Capsella grandiflora
Cagra.0568s0114 1.0kb downstream 1.0kb downstream 3983 true Scaffold568: 378150-382132 Capsella grandiflora
Cagra.0568s0114 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 381133-382132 Capsella grandiflora
Cagra.0568s0114 2.0kb upstream 2.0kb upstream 4983 true Scaffold568: 376150-381132 Capsella grandiflora
Cagra.0568s0114 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 376150-378149 Capsella grandiflora
Cagra.0568s0114 2.0kb downstream 2.0kb downstream 4983 true Scaffold568: 378150-383132 Capsella grandiflora
Cagra.0568s0114 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 381133-383132 Capsella grandiflora
Cagra.0568s0114 5.0kb upstream 5.0kb upstream 7983 true Scaffold568: 373150-381132 Capsella grandiflora
Cagra.0568s0114 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 373150-378149 Capsella grandiflora
Cagra.0568s0114 5.0kb downstream 5.0kb downstream 7983 true Scaffold568: 378150-386132 Capsella grandiflora
Cagra.0568s0114 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 381133-386132 Capsella grandiflora
Cagra.0568s0114 10.0kb upstream 10.0kb upstream 12983 true Scaffold568: 368150-381132 Capsella grandiflora
Cagra.0568s0114 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 368150-378149 Capsella grandiflora
Cagra.0568s0114 10.0kb downstream 10.0kb downstream 12983 true Scaffold568: 378150-391132 Capsella grandiflora
Cagra.0568s0114 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 381133-391132 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364829 5261 Brassicaceae View MSA
123835916 5264 Brassicales-Malvales View MSA
124338618 5266 SBM View MSA
124237542 5268 Malvidae View MSA
124064867 5270 Rosid View MSA
123751492 5271 Pentapetalae View MSA
122792638 5272 Eudicot View MSA
122047846 5273 Angiosperm View MSA
121345378 5274 Embryophyte View MSA
123424043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain