Gene : Cagra.0568s0132 C. grandiflora v1.1
Defline:  (1 of 1) PF00251//PF08244//PF11837 - Glycosyl hydrolases family 32 N-terminal domain (Glyco_hydro_32N) // Glycosyl hydrolases family 32 C terminal (Glyco_hydro_32C) // Domain of unknown function (DUF3357) (DUF3357) Genomic Order:  132
Name:  ? Cagra.0568s0132 Secondary Identifier:  ? PAC:28911003
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-621 Capsella grandiflora pathologic  
Cgrandiflora PWY66-373 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0132 0.5kb upstream 0.5kb upstream 4207 true Scaffold568: 443598-447804 Capsella grandiflora
Cagra.0568s0132 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 443598-444097 Capsella grandiflora
Cagra.0568s0132 0.5kb downstream 0.5kb downstream 4207 true Scaffold568: 444098-448304 Capsella grandiflora
Cagra.0568s0132 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 447805-448304 Capsella grandiflora
Cagra.0568s0132 1.0kb upstream 1.0kb upstream 4707 true Scaffold568: 443098-447804 Capsella grandiflora
Cagra.0568s0132 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 443098-444097 Capsella grandiflora
Cagra.0568s0132 1.0kb downstream 1.0kb downstream 4707 true Scaffold568: 444098-448804 Capsella grandiflora
Cagra.0568s0132 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 447805-448804 Capsella grandiflora
Cagra.0568s0132 2.0kb upstream 2.0kb upstream 5707 true Scaffold568: 442098-447804 Capsella grandiflora
Cagra.0568s0132 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 442098-444097 Capsella grandiflora
Cagra.0568s0132 2.0kb downstream 2.0kb downstream 5707 true Scaffold568: 444098-449804 Capsella grandiflora
Cagra.0568s0132 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 447805-449804 Capsella grandiflora
Cagra.0568s0132 5.0kb upstream 5.0kb upstream 8707 true Scaffold568: 439098-447804 Capsella grandiflora
Cagra.0568s0132 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 439098-444097 Capsella grandiflora
Cagra.0568s0132 5.0kb downstream 5.0kb downstream 8707 true Scaffold568: 444098-452804 Capsella grandiflora
Cagra.0568s0132 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 447805-452804 Capsella grandiflora
Cagra.0568s0132 10.0kb upstream 10.0kb upstream 13707 true Scaffold568: 434098-447804 Capsella grandiflora
Cagra.0568s0132 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 434098-444097 Capsella grandiflora
Cagra.0568s0132 10.0kb downstream 10.0kb downstream 13707 true Scaffold568: 444098-457804 Capsella grandiflora
Cagra.0568s0132 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 447805-457804 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362944 5261 Brassicaceae View MSA
123833145 5264 Brassicales-Malvales View MSA
124346860 5266 SBM View MSA
124237884 5268 Malvidae View MSA
124068075 5270 Rosid View MSA
123746739 5271 Pentapetalae View MSA
122793331 5272 Eudicot View MSA
122044228 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain