Gene : Cagra.0568s0147 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  147
Name:  ? Cagra.0568s0147 Secondary Identifier:  ? PAC:28910930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0147 0.5kb upstream 0.5kb upstream 2057 true Scaffold568: 507908-509964 Capsella grandiflora
Cagra.0568s0147 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 507908-508407 Capsella grandiflora
Cagra.0568s0147 0.5kb downstream 0.5kb downstream 2057 true Scaffold568: 508408-510464 Capsella grandiflora
Cagra.0568s0147 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 509965-510464 Capsella grandiflora
Cagra.0568s0147 1.0kb upstream 1.0kb upstream 2557 true Scaffold568: 507408-509964 Capsella grandiflora
Cagra.0568s0147 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 507408-508407 Capsella grandiflora
Cagra.0568s0147 1.0kb downstream 1.0kb downstream 2557 true Scaffold568: 508408-510964 Capsella grandiflora
Cagra.0568s0147 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 509965-510964 Capsella grandiflora
Cagra.0568s0147 2.0kb upstream 2.0kb upstream 3557 true Scaffold568: 506408-509964 Capsella grandiflora
Cagra.0568s0147 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 506408-508407 Capsella grandiflora
Cagra.0568s0147 2.0kb downstream 2.0kb downstream 3557 true Scaffold568: 508408-511964 Capsella grandiflora
Cagra.0568s0147 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 509965-511964 Capsella grandiflora
Cagra.0568s0147 5.0kb upstream 5.0kb upstream 6557 true Scaffold568: 503408-509964 Capsella grandiflora
Cagra.0568s0147 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 503408-508407 Capsella grandiflora
Cagra.0568s0147 5.0kb downstream 5.0kb downstream 6557 true Scaffold568: 508408-514964 Capsella grandiflora
Cagra.0568s0147 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 509965-514964 Capsella grandiflora
Cagra.0568s0147 10.0kb upstream 10.0kb upstream 11557 true Scaffold568: 498408-509964 Capsella grandiflora
Cagra.0568s0147 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 498408-508407 Capsella grandiflora
Cagra.0568s0147 10.0kb downstream 10.0kb downstream 11557 true Scaffold568: 508408-519964 Capsella grandiflora
Cagra.0568s0147 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 509965-519964 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381235 5261 Brassicaceae View MSA
123835843 5264 Brassicales-Malvales View MSA
124341582 5266 SBM View MSA
124248925 5268 Malvidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain