Gene : Cagra.0568s0156 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10634:SF38 - ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1-RELATED Genomic Order:  156
Name:  ? Cagra.0568s0156 Secondary Identifier:  ? PAC:28910964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0156 0.5kb upstream 0.5kb upstream 2620 true Scaffold568: 539519-542138 Capsella grandiflora
Cagra.0568s0156 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 541639-542138 Capsella grandiflora
Cagra.0568s0156 0.5kb downstream 0.5kb downstream 2620 true Scaffold568: 539019-541638 Capsella grandiflora
Cagra.0568s0156 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 539019-539518 Capsella grandiflora
Cagra.0568s0156 1.0kb upstream 1.0kb upstream 3120 true Scaffold568: 539519-542638 Capsella grandiflora
Cagra.0568s0156 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 541639-542638 Capsella grandiflora
Cagra.0568s0156 1.0kb downstream 1.0kb downstream 3120 true Scaffold568: 538519-541638 Capsella grandiflora
Cagra.0568s0156 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 538519-539518 Capsella grandiflora
Cagra.0568s0156 2.0kb upstream 2.0kb upstream 4120 true Scaffold568: 539519-543638 Capsella grandiflora
Cagra.0568s0156 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 541639-543638 Capsella grandiflora
Cagra.0568s0156 2.0kb downstream 2.0kb downstream 4120 true Scaffold568: 537519-541638 Capsella grandiflora
Cagra.0568s0156 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 537519-539518 Capsella grandiflora
Cagra.0568s0156 5.0kb upstream 5.0kb upstream 7120 true Scaffold568: 539519-546638 Capsella grandiflora
Cagra.0568s0156 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 541639-546638 Capsella grandiflora
Cagra.0568s0156 5.0kb downstream 5.0kb downstream 7120 true Scaffold568: 534519-541638 Capsella grandiflora
Cagra.0568s0156 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 534519-539518 Capsella grandiflora
Cagra.0568s0156 10.0kb upstream 10.0kb upstream 12120 true Scaffold568: 539519-551638 Capsella grandiflora
Cagra.0568s0156 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 541639-551638 Capsella grandiflora
Cagra.0568s0156 10.0kb downstream 10.0kb downstream 12120 true Scaffold568: 529519-541638 Capsella grandiflora
Cagra.0568s0156 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 529519-539518 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369281 5261 Brassicaceae View MSA
123840865 5264 Brassicales-Malvales View MSA
124339440 5266 SBM View MSA
124251311 5268 Malvidae View MSA
124063038 5270 Rosid View MSA
123746917 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain