Gene : Cagra.0568s0163 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10003:SF27 - COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE Genomic Order:  163
Name:  ? Cagra.0568s0163 Secondary Identifier:  ? PAC:28910844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0163 0.5kb upstream 0.5kb upstream 2270 true Scaffold568: 567243-569512 Capsella grandiflora
Cagra.0568s0163 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 569013-569512 Capsella grandiflora
Cagra.0568s0163 0.5kb downstream 0.5kb downstream 2270 true Scaffold568: 566743-569012 Capsella grandiflora
Cagra.0568s0163 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 566743-567242 Capsella grandiflora
Cagra.0568s0163 1.0kb upstream 1.0kb upstream 2770 true Scaffold568: 567243-570012 Capsella grandiflora
Cagra.0568s0163 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 569013-570012 Capsella grandiflora
Cagra.0568s0163 1.0kb downstream 1.0kb downstream 2770 true Scaffold568: 566243-569012 Capsella grandiflora
Cagra.0568s0163 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 566243-567242 Capsella grandiflora
Cagra.0568s0163 2.0kb upstream 2.0kb upstream 3770 true Scaffold568: 567243-571012 Capsella grandiflora
Cagra.0568s0163 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 569013-571012 Capsella grandiflora
Cagra.0568s0163 2.0kb downstream 2.0kb downstream 3770 true Scaffold568: 565243-569012 Capsella grandiflora
Cagra.0568s0163 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 565243-567242 Capsella grandiflora
Cagra.0568s0163 5.0kb upstream 5.0kb upstream 6770 true Scaffold568: 567243-574012 Capsella grandiflora
Cagra.0568s0163 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 569013-574012 Capsella grandiflora
Cagra.0568s0163 5.0kb downstream 5.0kb downstream 6770 true Scaffold568: 562243-569012 Capsella grandiflora
Cagra.0568s0163 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 562243-567242 Capsella grandiflora
Cagra.0568s0163 10.0kb upstream 10.0kb upstream 11770 true Scaffold568: 567243-579012 Capsella grandiflora
Cagra.0568s0163 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 569013-579012 Capsella grandiflora
Cagra.0568s0163 10.0kb downstream 10.0kb downstream 11770 true Scaffold568: 557243-569012 Capsella grandiflora
Cagra.0568s0163 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 557243-567242 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361540 5261 Brassicaceae View MSA
123832400 5264 Brassicales-Malvales View MSA
124346051 5266 SBM View MSA
124241702 5268 Malvidae View MSA
124062271 5270 Rosid View MSA
123739046 5271 Pentapetalae View MSA
122793199 5272 Eudicot View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain