Gene : Cagra.0567s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31301:SF28 - LOB DOMAIN-CONTAINING PROTEIN 13 Genomic Order:  1
Name:  ? Cagra.0567s0001 Secondary Identifier:  ? PAC:28910741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0567s0001 0.5kb upstream 0.5kb upstream 1765 true Scaffold567: 1458-3222 Capsella grandiflora
Cagra.0567s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold567: 2723-3222 Capsella grandiflora
Cagra.0567s0001 0.5kb downstream 0.5kb downstream 1765 true Scaffold567: 958-2722 Capsella grandiflora
Cagra.0567s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold567: 958-1457 Capsella grandiflora
Cagra.0567s0001 1.0kb upstream 1.0kb upstream 2265 true Scaffold567: 1458-3722 Capsella grandiflora
Cagra.0567s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold567: 2723-3722 Capsella grandiflora
Cagra.0567s0001 1.0kb downstream 1.0kb downstream 2265 true Scaffold567: 458-2722 Capsella grandiflora
Cagra.0567s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold567: 458-1457 Capsella grandiflora
Cagra.0567s0001 2.0kb upstream 2.0kb upstream 3265 true Scaffold567: 1458-4722 Capsella grandiflora
Cagra.0567s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold567: 2723-4722 Capsella grandiflora
Cagra.0567s0001 2.0kb downstream 2.0kb downstream 2722 true Scaffold567: 1-2722 Capsella grandiflora
Cagra.0567s0001 2.0kb downstream 2.0kb downstream 1457 false Scaffold567: 1-1457 Capsella grandiflora
Cagra.0567s0001 5.0kb upstream 5.0kb upstream 6265 true Scaffold567: 1458-7722 Capsella grandiflora
Cagra.0567s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold567: 2723-7722 Capsella grandiflora
Cagra.0567s0001 5.0kb downstream 5.0kb downstream 2722 true Scaffold567: 1-2722 Capsella grandiflora
Cagra.0567s0001 5.0kb downstream 5.0kb downstream 1457 false Scaffold567: 1-1457 Capsella grandiflora
Cagra.0567s0001 10.0kb upstream 10.0kb upstream 11265 true Scaffold567: 1458-12722 Capsella grandiflora
Cagra.0567s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold567: 2723-12722 Capsella grandiflora
Cagra.0567s0001 10.0kb downstream 10.0kb downstream 2722 true Scaffold567: 1-2722 Capsella grandiflora
Cagra.0567s0001 10.0kb downstream 10.0kb downstream 1457 false Scaffold567: 1-1457 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366472 5261 Brassicaceae View MSA
123799180 5264 Brassicales-Malvales View MSA
124296728 5266 SBM View MSA
124254106 5268 Malvidae View MSA
124067191 5270 Rosid View MSA
123746231 5271 Pentapetalae View MSA
122789083 5272 Eudicot View MSA
122043702 5273 Angiosperm View MSA
121351035 5274 Embryophyte View MSA
123381985 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain