Gene : Cagra.0567s0006 C. grandiflora v1.1
Defline:  (1 of 2) 4.99.1.1 - Ferrochelatase / Protoheme ferro-lyase Genomic Order:  6
Name:  ? Cagra.0567s0006 Secondary Identifier:  ? PAC:28910734
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora HEME-BIOSYNTHESIS-II Capsella grandiflora pathologic  
Cgrandiflora PWY-5918 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0567s0006 0.5kb upstream 0.5kb upstream 3909 true Scaffold567: 22870-26778 Capsella grandiflora
Cagra.0567s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold567: 26279-26778 Capsella grandiflora
Cagra.0567s0006 0.5kb downstream 0.5kb downstream 3909 true Scaffold567: 22370-26278 Capsella grandiflora
Cagra.0567s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold567: 22370-22869 Capsella grandiflora
Cagra.0567s0006 1.0kb upstream 1.0kb upstream 4409 true Scaffold567: 22870-27278 Capsella grandiflora
Cagra.0567s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold567: 26279-27278 Capsella grandiflora
Cagra.0567s0006 1.0kb downstream 1.0kb downstream 4409 true Scaffold567: 21870-26278 Capsella grandiflora
Cagra.0567s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold567: 21870-22869 Capsella grandiflora
Cagra.0567s0006 2.0kb upstream 2.0kb upstream 5409 true Scaffold567: 22870-28278 Capsella grandiflora
Cagra.0567s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold567: 26279-28278 Capsella grandiflora
Cagra.0567s0006 2.0kb downstream 2.0kb downstream 5409 true Scaffold567: 20870-26278 Capsella grandiflora
Cagra.0567s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold567: 20870-22869 Capsella grandiflora
Cagra.0567s0006 5.0kb upstream 5.0kb upstream 8409 true Scaffold567: 22870-31278 Capsella grandiflora
Cagra.0567s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold567: 26279-31278 Capsella grandiflora
Cagra.0567s0006 5.0kb downstream 5.0kb downstream 8409 true Scaffold567: 17870-26278 Capsella grandiflora
Cagra.0567s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold567: 17870-22869 Capsella grandiflora
Cagra.0567s0006 10.0kb upstream 10.0kb upstream 13409 true Scaffold567: 22870-36278 Capsella grandiflora
Cagra.0567s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold567: 26279-36278 Capsella grandiflora
Cagra.0567s0006 10.0kb downstream 10.0kb downstream 13409 true Scaffold567: 12870-26278 Capsella grandiflora
Cagra.0567s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold567: 12870-22869 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372060 5261 Brassicaceae View MSA
123834535 5264 Brassicales-Malvales View MSA
124342500 5266 SBM View MSA
124240498 5268 Malvidae View MSA
124065321 5270 Rosid View MSA
123739470 5271 Pentapetalae View MSA
122791512 5272 Eudicot View MSA
122044162 5273 Angiosperm View MSA
121346360 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain