Gene : Cagra.0568s0045 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10566//PTHR10566:SF93 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED Genomic Order:  45
Name:  ? Cagra.0568s0045 Secondary Identifier:  ? PAC:28911016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0045 0.5kb upstream 0.5kb upstream 3673 true Scaffold568: 157501-161173 Capsella grandiflora
Cagra.0568s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 160674-161173 Capsella grandiflora
Cagra.0568s0045 0.5kb downstream 0.5kb downstream 3673 true Scaffold568: 157001-160673 Capsella grandiflora
Cagra.0568s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 157001-157500 Capsella grandiflora
Cagra.0568s0045 1.0kb upstream 1.0kb upstream 4173 true Scaffold568: 157501-161673 Capsella grandiflora
Cagra.0568s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 160674-161673 Capsella grandiflora
Cagra.0568s0045 1.0kb downstream 1.0kb downstream 4173 true Scaffold568: 156501-160673 Capsella grandiflora
Cagra.0568s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 156501-157500 Capsella grandiflora
Cagra.0568s0045 2.0kb upstream 2.0kb upstream 5173 true Scaffold568: 157501-162673 Capsella grandiflora
Cagra.0568s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 160674-162673 Capsella grandiflora
Cagra.0568s0045 2.0kb downstream 2.0kb downstream 5173 true Scaffold568: 155501-160673 Capsella grandiflora
Cagra.0568s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 155501-157500 Capsella grandiflora
Cagra.0568s0045 5.0kb upstream 5.0kb upstream 8173 true Scaffold568: 157501-165673 Capsella grandiflora
Cagra.0568s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 160674-165673 Capsella grandiflora
Cagra.0568s0045 5.0kb downstream 5.0kb downstream 8173 true Scaffold568: 152501-160673 Capsella grandiflora
Cagra.0568s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 152501-157500 Capsella grandiflora
Cagra.0568s0045 10.0kb upstream 10.0kb upstream 13173 true Scaffold568: 157501-170673 Capsella grandiflora
Cagra.0568s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 160674-170673 Capsella grandiflora
Cagra.0568s0045 10.0kb downstream 10.0kb downstream 13173 true Scaffold568: 147501-160673 Capsella grandiflora
Cagra.0568s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 147501-157500 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371185 5261 Brassicaceae View MSA
123832450 5264 Brassicales-Malvales View MSA
124343453 5266 SBM View MSA
124248688 5268 Malvidae View MSA
124066651 5270 Rosid View MSA
123751208 5271 Pentapetalae View MSA
122797735 5272 Eudicot View MSA
122043373 5273 Angiosperm View MSA
121343858 5274 Embryophyte View MSA
123428037 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain