Gene : Cagra.0568s0059 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31062:SF1 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED Genomic Order:  59
Name:  ? Cagra.0568s0059 Secondary Identifier:  ? PAC:28910990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0059 0.5kb upstream 0.5kb upstream 2050 true Scaffold568: 190384-192433 Capsella grandiflora
Cagra.0568s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 191934-192433 Capsella grandiflora
Cagra.0568s0059 0.5kb downstream 0.5kb downstream 2050 true Scaffold568: 189884-191933 Capsella grandiflora
Cagra.0568s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 189884-190383 Capsella grandiflora
Cagra.0568s0059 1.0kb upstream 1.0kb upstream 2550 true Scaffold568: 190384-192933 Capsella grandiflora
Cagra.0568s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 191934-192933 Capsella grandiflora
Cagra.0568s0059 1.0kb downstream 1.0kb downstream 2550 true Scaffold568: 189384-191933 Capsella grandiflora
Cagra.0568s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 189384-190383 Capsella grandiflora
Cagra.0568s0059 2.0kb upstream 2.0kb upstream 3550 true Scaffold568: 190384-193933 Capsella grandiflora
Cagra.0568s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 191934-193933 Capsella grandiflora
Cagra.0568s0059 2.0kb downstream 2.0kb downstream 3550 true Scaffold568: 188384-191933 Capsella grandiflora
Cagra.0568s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 188384-190383 Capsella grandiflora
Cagra.0568s0059 5.0kb upstream 5.0kb upstream 6550 true Scaffold568: 190384-196933 Capsella grandiflora
Cagra.0568s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 191934-196933 Capsella grandiflora
Cagra.0568s0059 5.0kb downstream 5.0kb downstream 6550 true Scaffold568: 185384-191933 Capsella grandiflora
Cagra.0568s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 185384-190383 Capsella grandiflora
Cagra.0568s0059 10.0kb upstream 10.0kb upstream 11550 true Scaffold568: 190384-201933 Capsella grandiflora
Cagra.0568s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 191934-201933 Capsella grandiflora
Cagra.0568s0059 10.0kb downstream 10.0kb downstream 11550 true Scaffold568: 180384-191933 Capsella grandiflora
Cagra.0568s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 180384-190383 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360550 5261 Brassicaceae View MSA
123840349 5264 Brassicales-Malvales View MSA
124343452 5266 SBM View MSA
124240982 5268 Malvidae View MSA
124062437 5270 Rosid View MSA
123740499 5271 Pentapetalae View MSA
122785607 5272 Eudicot View MSA
122047013 5273 Angiosperm View MSA
121352157 5274 Embryophyte View MSA
123382575 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain