Gene : Cagra.0551s0065 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  65
Name:  ? Cagra.0551s0065 Secondary Identifier:  ? PAC:28898973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0065 0.5kb upstream 0.5kb upstream 8133 true Scaffold551: 208155-216287 Capsella grandiflora
Cagra.0551s0065 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 208155-208654 Capsella grandiflora
Cagra.0551s0065 0.5kb downstream 0.5kb downstream 8133 true Scaffold551: 208655-216787 Capsella grandiflora
Cagra.0551s0065 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 216288-216787 Capsella grandiflora
Cagra.0551s0065 1.0kb upstream 1.0kb upstream 8633 true Scaffold551: 207655-216287 Capsella grandiflora
Cagra.0551s0065 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 207655-208654 Capsella grandiflora
Cagra.0551s0065 1.0kb downstream 1.0kb downstream 8633 true Scaffold551: 208655-217287 Capsella grandiflora
Cagra.0551s0065 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 216288-217287 Capsella grandiflora
Cagra.0551s0065 2.0kb upstream 2.0kb upstream 9633 true Scaffold551: 206655-216287 Capsella grandiflora
Cagra.0551s0065 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 206655-208654 Capsella grandiflora
Cagra.0551s0065 2.0kb downstream 2.0kb downstream 9633 true Scaffold551: 208655-218287 Capsella grandiflora
Cagra.0551s0065 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 216288-218287 Capsella grandiflora
Cagra.0551s0065 5.0kb upstream 5.0kb upstream 12633 true Scaffold551: 203655-216287 Capsella grandiflora
Cagra.0551s0065 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 203655-208654 Capsella grandiflora
Cagra.0551s0065 5.0kb downstream 5.0kb downstream 11959 true Scaffold551: 208655-220613 Capsella grandiflora
Cagra.0551s0065 5.0kb downstream 5.0kb downstream 4326 false Scaffold551: 216288-220613 Capsella grandiflora
Cagra.0551s0065 10.0kb upstream 10.0kb upstream 17633 true Scaffold551: 198655-216287 Capsella grandiflora
Cagra.0551s0065 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 198655-208654 Capsella grandiflora
Cagra.0551s0065 10.0kb downstream 10.0kb downstream 11959 true Scaffold551: 208655-220613 Capsella grandiflora
Cagra.0551s0065 10.0kb downstream 10.0kb downstream 4326 false Scaffold551: 216288-220613 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377448 5261 Brassicaceae View MSA
123839388 5264 Brassicales-Malvales View MSA
124337608 5266 SBM View MSA
124240604 5268 Malvidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain