Gene : Cagra.0551s0062 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12801:SF66 - EXONUCLEASE-LIKE PROTEIN Genomic Order:  62
Name:  ? Cagra.0551s0062 Secondary Identifier:  ? PAC:28898977
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0062 0.5kb upstream 0.5kb upstream 2438 true Scaffold551: 197181-199618 Capsella grandiflora
Cagra.0551s0062 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 197181-197680 Capsella grandiflora
Cagra.0551s0062 0.5kb downstream 0.5kb downstream 2438 true Scaffold551: 197681-200118 Capsella grandiflora
Cagra.0551s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 199619-200118 Capsella grandiflora
Cagra.0551s0062 1.0kb upstream 1.0kb upstream 2938 true Scaffold551: 196681-199618 Capsella grandiflora
Cagra.0551s0062 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 196681-197680 Capsella grandiflora
Cagra.0551s0062 1.0kb downstream 1.0kb downstream 2938 true Scaffold551: 197681-200618 Capsella grandiflora
Cagra.0551s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 199619-200618 Capsella grandiflora
Cagra.0551s0062 2.0kb upstream 2.0kb upstream 3938 true Scaffold551: 195681-199618 Capsella grandiflora
Cagra.0551s0062 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 195681-197680 Capsella grandiflora
Cagra.0551s0062 2.0kb downstream 2.0kb downstream 3938 true Scaffold551: 197681-201618 Capsella grandiflora
Cagra.0551s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 199619-201618 Capsella grandiflora
Cagra.0551s0062 5.0kb upstream 5.0kb upstream 6938 true Scaffold551: 192681-199618 Capsella grandiflora
Cagra.0551s0062 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 192681-197680 Capsella grandiflora
Cagra.0551s0062 5.0kb downstream 5.0kb downstream 6938 true Scaffold551: 197681-204618 Capsella grandiflora
Cagra.0551s0062 5.0kb downstream 5.0kb downstream 5000 false Scaffold551: 199619-204618 Capsella grandiflora
Cagra.0551s0062 10.0kb upstream 10.0kb upstream 11938 true Scaffold551: 187681-199618 Capsella grandiflora
Cagra.0551s0062 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 187681-197680 Capsella grandiflora
Cagra.0551s0062 10.0kb downstream 10.0kb downstream 11938 true Scaffold551: 197681-209618 Capsella grandiflora
Cagra.0551s0062 10.0kb downstream 10.0kb downstream 10000 false Scaffold551: 199619-209618 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373040 5261 Brassicaceae View MSA
123830301 5264 Brassicales-Malvales View MSA
124348524 5266 SBM View MSA
124238671 5268 Malvidae View MSA
124069568 5270 Rosid View MSA
123750335 5271 Pentapetalae View MSA
122794102 5272 Eudicot View MSA
122048562 5273 Angiosperm View MSA
121349670 5274 Embryophyte View MSA
123428502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain