Gene : Cagra.0558s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR36738:SF1 - EXPRESSED PROTEIN Genomic Order:  3
Name:  ? Cagra.0558s0003 Secondary Identifier:  ? PAC:28894449
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0558s0003 0.5kb upstream 0.5kb upstream 2254 true Scaffold558: 12237-14490 Capsella grandiflora
Cagra.0558s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold558: 13991-14490 Capsella grandiflora
Cagra.0558s0003 0.5kb downstream 0.5kb downstream 2254 true Scaffold558: 11737-13990 Capsella grandiflora
Cagra.0558s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold558: 11737-12236 Capsella grandiflora
Cagra.0558s0003 1.0kb upstream 1.0kb upstream 2754 true Scaffold558: 12237-14990 Capsella grandiflora
Cagra.0558s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold558: 13991-14990 Capsella grandiflora
Cagra.0558s0003 1.0kb downstream 1.0kb downstream 2754 true Scaffold558: 11237-13990 Capsella grandiflora
Cagra.0558s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold558: 11237-12236 Capsella grandiflora
Cagra.0558s0003 2.0kb upstream 2.0kb upstream 3754 true Scaffold558: 12237-15990 Capsella grandiflora
Cagra.0558s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold558: 13991-15990 Capsella grandiflora
Cagra.0558s0003 2.0kb downstream 2.0kb downstream 3754 true Scaffold558: 10237-13990 Capsella grandiflora
Cagra.0558s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold558: 10237-12236 Capsella grandiflora
Cagra.0558s0003 5.0kb upstream 5.0kb upstream 6754 true Scaffold558: 12237-18990 Capsella grandiflora
Cagra.0558s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold558: 13991-18990 Capsella grandiflora
Cagra.0558s0003 5.0kb downstream 5.0kb downstream 6754 true Scaffold558: 7237-13990 Capsella grandiflora
Cagra.0558s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold558: 7237-12236 Capsella grandiflora
Cagra.0558s0003 10.0kb upstream 10.0kb upstream 11754 true Scaffold558: 12237-23990 Capsella grandiflora
Cagra.0558s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold558: 13991-23990 Capsella grandiflora
Cagra.0558s0003 10.0kb downstream 10.0kb downstream 11754 true Scaffold558: 2237-13990 Capsella grandiflora
Cagra.0558s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold558: 2237-12236 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041422 5273 Angiosperm View MSA
122375069 5261 Brassicaceae View MSA
123829272 5264 Brassicales-Malvales View MSA
124345586 5266 SBM View MSA
124237486 5268 Malvidae View MSA
124061850 5270 Rosid View MSA
123751922 5271 Pentapetalae View MSA
122793004 5272 Eudicot View MSA
121347775 5274 Embryophyte View MSA
123423846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain