Gene : Cagra.0551s0066 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  66
Name:  ? Cagra.0551s0066 Secondary Identifier:  ? PAC:28898988
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora DETOX1-PWY-1 Capsella grandiflora pathologic  
Cgrandiflora PWY-4081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0066 0.5kb upstream 0.5kb upstream 1794 true Scaffold551: 215949-217742 Capsella grandiflora
Cagra.0551s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 215949-216448 Capsella grandiflora
Cagra.0551s0066 0.5kb downstream 0.5kb downstream 1794 true Scaffold551: 216449-218242 Capsella grandiflora
Cagra.0551s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 217743-218242 Capsella grandiflora
Cagra.0551s0066 1.0kb upstream 1.0kb upstream 2294 true Scaffold551: 215449-217742 Capsella grandiflora
Cagra.0551s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 215449-216448 Capsella grandiflora
Cagra.0551s0066 1.0kb downstream 1.0kb downstream 2294 true Scaffold551: 216449-218742 Capsella grandiflora
Cagra.0551s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 217743-218742 Capsella grandiflora
Cagra.0551s0066 2.0kb upstream 2.0kb upstream 3294 true Scaffold551: 214449-217742 Capsella grandiflora
Cagra.0551s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 214449-216448 Capsella grandiflora
Cagra.0551s0066 2.0kb downstream 2.0kb downstream 3294 true Scaffold551: 216449-219742 Capsella grandiflora
Cagra.0551s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 217743-219742 Capsella grandiflora
Cagra.0551s0066 5.0kb upstream 5.0kb upstream 6294 true Scaffold551: 211449-217742 Capsella grandiflora
Cagra.0551s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 211449-216448 Capsella grandiflora
Cagra.0551s0066 5.0kb downstream 5.0kb downstream 4165 true Scaffold551: 216449-220613 Capsella grandiflora
Cagra.0551s0066 5.0kb downstream 5.0kb downstream 2871 false Scaffold551: 217743-220613 Capsella grandiflora
Cagra.0551s0066 10.0kb upstream 10.0kb upstream 11294 true Scaffold551: 206449-217742 Capsella grandiflora
Cagra.0551s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 206449-216448 Capsella grandiflora
Cagra.0551s0066 10.0kb downstream 10.0kb downstream 4165 true Scaffold551: 216449-220613 Capsella grandiflora
Cagra.0551s0066 10.0kb downstream 10.0kb downstream 2871 false Scaffold551: 217743-220613 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122367831 5261 Brassicaceae View MSA
123836838 5264 Brassicales-Malvales View MSA
124339844 5266 SBM View MSA
124253459 5268 Malvidae View MSA
124065058 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain