Gene : Cagra.0558s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24221:SF119 - ABC TRANSPORTER B FAMILY MEMBER 1 Genomic Order:  7
Name:  ? Cagra.0558s0007 Secondary Identifier:  ? PAC:28894444
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0558s0007 0.5kb upstream 0.5kb upstream 6181 true Scaffold558: 34186-40366 Capsella grandiflora
Cagra.0558s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold558: 34186-34685 Capsella grandiflora
Cagra.0558s0007 0.5kb downstream 0.5kb downstream 6181 true Scaffold558: 34686-40866 Capsella grandiflora
Cagra.0558s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold558: 40367-40866 Capsella grandiflora
Cagra.0558s0007 1.0kb upstream 1.0kb upstream 6681 true Scaffold558: 33686-40366 Capsella grandiflora
Cagra.0558s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold558: 33686-34685 Capsella grandiflora
Cagra.0558s0007 1.0kb downstream 1.0kb downstream 6681 true Scaffold558: 34686-41366 Capsella grandiflora
Cagra.0558s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold558: 40367-41366 Capsella grandiflora
Cagra.0558s0007 2.0kb upstream 2.0kb upstream 7681 true Scaffold558: 32686-40366 Capsella grandiflora
Cagra.0558s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold558: 32686-34685 Capsella grandiflora
Cagra.0558s0007 2.0kb downstream 2.0kb downstream 7681 true Scaffold558: 34686-42366 Capsella grandiflora
Cagra.0558s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold558: 40367-42366 Capsella grandiflora
Cagra.0558s0007 5.0kb upstream 5.0kb upstream 10681 true Scaffold558: 29686-40366 Capsella grandiflora
Cagra.0558s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold558: 29686-34685 Capsella grandiflora
Cagra.0558s0007 5.0kb downstream 5.0kb downstream 10681 true Scaffold558: 34686-45366 Capsella grandiflora
Cagra.0558s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold558: 40367-45366 Capsella grandiflora
Cagra.0558s0007 10.0kb upstream 10.0kb upstream 15681 true Scaffold558: 24686-40366 Capsella grandiflora
Cagra.0558s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold558: 24686-34685 Capsella grandiflora
Cagra.0558s0007 10.0kb downstream 10.0kb downstream 15681 true Scaffold558: 34686-50366 Capsella grandiflora
Cagra.0558s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold558: 40367-50366 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376360 5261 Brassicaceae View MSA
123838012 5264 Brassicales-Malvales View MSA
124345264 5266 SBM View MSA
124243125 5268 Malvidae View MSA
124068120 5270 Rosid View MSA
123742106 5271 Pentapetalae View MSA
122796466 5272 Eudicot View MSA
122044866 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350880 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain