Gene : Cagra.0562s0018 C. grandiflora v1.1
Defline:  (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase Genomic Order:  18
Name:  ? Cagra.0562s0018 Secondary Identifier:  ? PAC:28910806
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7238 Capsella grandiflora pathologic  
Cgrandiflora SUCSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0018 0.5kb upstream 0.5kb upstream 3319 true Scaffold562: 53647-56965 Capsella grandiflora
Cagra.0562s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 56466-56965 Capsella grandiflora
Cagra.0562s0018 0.5kb downstream 0.5kb downstream 3319 true Scaffold562: 53147-56465 Capsella grandiflora
Cagra.0562s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 53147-53646 Capsella grandiflora
Cagra.0562s0018 1.0kb upstream 1.0kb upstream 3819 true Scaffold562: 53647-57465 Capsella grandiflora
Cagra.0562s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 56466-57465 Capsella grandiflora
Cagra.0562s0018 1.0kb downstream 1.0kb downstream 3819 true Scaffold562: 52647-56465 Capsella grandiflora
Cagra.0562s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 52647-53646 Capsella grandiflora
Cagra.0562s0018 2.0kb upstream 2.0kb upstream 4819 true Scaffold562: 53647-58465 Capsella grandiflora
Cagra.0562s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 56466-58465 Capsella grandiflora
Cagra.0562s0018 2.0kb downstream 2.0kb downstream 4819 true Scaffold562: 51647-56465 Capsella grandiflora
Cagra.0562s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 51647-53646 Capsella grandiflora
Cagra.0562s0018 5.0kb upstream 5.0kb upstream 7819 true Scaffold562: 53647-61465 Capsella grandiflora
Cagra.0562s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 56466-61465 Capsella grandiflora
Cagra.0562s0018 5.0kb downstream 5.0kb downstream 7819 true Scaffold562: 48647-56465 Capsella grandiflora
Cagra.0562s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 48647-53646 Capsella grandiflora
Cagra.0562s0018 10.0kb upstream 10.0kb upstream 12819 true Scaffold562: 53647-66465 Capsella grandiflora
Cagra.0562s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 56466-66465 Capsella grandiflora
Cagra.0562s0018 10.0kb downstream 10.0kb downstream 12819 true Scaffold562: 43647-56465 Capsella grandiflora
Cagra.0562s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 43647-53646 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511775 5273 Angiosperm View MSA
122378731 5261 Brassicaceae View MSA
123801974 5264 Brassicales-Malvales View MSA
124299210 5266 SBM View MSA
124150686 5268 Malvidae View MSA
123876259 5270 Rosid View MSA
123459957 5271 Pentapetalae View MSA
122495338 5272 Eudicot View MSA
120784806 5274 Embryophyte View MSA
122826698 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain