Gene : Cagra.0562s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10066:SF72 - GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN Genomic Order:  35
Name:  ? Cagra.0562s0035 Secondary Identifier:  ? PAC:28910759
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0035 0.5kb upstream 0.5kb upstream 8065 true Scaffold562: 120067-128131 Capsella grandiflora
Cagra.0562s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 127632-128131 Capsella grandiflora
Cagra.0562s0035 0.5kb downstream 0.5kb downstream 8065 true Scaffold562: 119567-127631 Capsella grandiflora
Cagra.0562s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 119567-120066 Capsella grandiflora
Cagra.0562s0035 1.0kb upstream 1.0kb upstream 8565 true Scaffold562: 120067-128631 Capsella grandiflora
Cagra.0562s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 127632-128631 Capsella grandiflora
Cagra.0562s0035 1.0kb downstream 1.0kb downstream 8565 true Scaffold562: 119067-127631 Capsella grandiflora
Cagra.0562s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 119067-120066 Capsella grandiflora
Cagra.0562s0035 2.0kb upstream 2.0kb upstream 9565 true Scaffold562: 120067-129631 Capsella grandiflora
Cagra.0562s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 127632-129631 Capsella grandiflora
Cagra.0562s0035 2.0kb downstream 2.0kb downstream 9565 true Scaffold562: 118067-127631 Capsella grandiflora
Cagra.0562s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 118067-120066 Capsella grandiflora
Cagra.0562s0035 5.0kb upstream 5.0kb upstream 12565 true Scaffold562: 120067-132631 Capsella grandiflora
Cagra.0562s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 127632-132631 Capsella grandiflora
Cagra.0562s0035 5.0kb downstream 5.0kb downstream 12565 true Scaffold562: 115067-127631 Capsella grandiflora
Cagra.0562s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 115067-120066 Capsella grandiflora
Cagra.0562s0035 10.0kb upstream 10.0kb upstream 17565 true Scaffold562: 120067-137631 Capsella grandiflora
Cagra.0562s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 127632-137631 Capsella grandiflora
Cagra.0562s0035 10.0kb downstream 10.0kb downstream 17565 true Scaffold562: 110067-127631 Capsella grandiflora
Cagra.0562s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 110067-120066 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369155 5261 Brassicaceae View MSA
123830728 5264 Brassicales-Malvales View MSA
124338662 5266 SBM View MSA
124245582 5268 Malvidae View MSA
124060617 5270 Rosid View MSA
123738127 5271 Pentapetalae View MSA
122786058 5272 Eudicot View MSA
122041739 5273 Angiosperm View MSA
121344656 5274 Embryophyte View MSA
123424001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain