Gene : Cagra.0562s0037 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11654:SF133 - PROTEIN NRT1/ PTR FAMILY 5.4 Genomic Order:  37
Name:  ? Cagra.0562s0037 Secondary Identifier:  ? PAC:28910783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0562s0037 0.5kb upstream 0.5kb upstream 4008 true Scaffold562: 133270-137277 Capsella grandiflora
Cagra.0562s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold562: 133270-133769 Capsella grandiflora
Cagra.0562s0037 0.5kb downstream 0.5kb downstream 4008 true Scaffold562: 133770-137777 Capsella grandiflora
Cagra.0562s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold562: 137278-137777 Capsella grandiflora
Cagra.0562s0037 1.0kb upstream 1.0kb upstream 4508 true Scaffold562: 132770-137277 Capsella grandiflora
Cagra.0562s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold562: 132770-133769 Capsella grandiflora
Cagra.0562s0037 1.0kb downstream 1.0kb downstream 4508 true Scaffold562: 133770-138277 Capsella grandiflora
Cagra.0562s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold562: 137278-138277 Capsella grandiflora
Cagra.0562s0037 2.0kb upstream 2.0kb upstream 5508 true Scaffold562: 131770-137277 Capsella grandiflora
Cagra.0562s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold562: 131770-133769 Capsella grandiflora
Cagra.0562s0037 2.0kb downstream 2.0kb downstream 5508 true Scaffold562: 133770-139277 Capsella grandiflora
Cagra.0562s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold562: 137278-139277 Capsella grandiflora
Cagra.0562s0037 5.0kb upstream 5.0kb upstream 8508 true Scaffold562: 128770-137277 Capsella grandiflora
Cagra.0562s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold562: 128770-133769 Capsella grandiflora
Cagra.0562s0037 5.0kb downstream 5.0kb downstream 8508 true Scaffold562: 133770-142277 Capsella grandiflora
Cagra.0562s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold562: 137278-142277 Capsella grandiflora
Cagra.0562s0037 10.0kb upstream 10.0kb upstream 13508 true Scaffold562: 123770-137277 Capsella grandiflora
Cagra.0562s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold562: 123770-133769 Capsella grandiflora
Cagra.0562s0037 10.0kb downstream 10.0kb downstream 13508 true Scaffold562: 133770-147277 Capsella grandiflora
Cagra.0562s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold562: 137278-147277 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368765 5261 Brassicaceae View MSA
123834357 5264 Brassicales-Malvales View MSA
124345677 5266 SBM View MSA
124250409 5268 Malvidae View MSA
124072742 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain