Gene : Cagra.0542s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12565:SF165 - TRANSCRIPTION FACTOR PIF7 Genomic Order:  21
Name:  ? Cagra.0542s0021 Secondary Identifier:  ? PAC:28916769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0021 0.5kb upstream 0.5kb upstream 2705 true Scaffold542: 76632-79336 Capsella grandiflora
Cagra.0542s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 78837-79336 Capsella grandiflora
Cagra.0542s0021 0.5kb downstream 0.5kb downstream 2705 true Scaffold542: 76132-78836 Capsella grandiflora
Cagra.0542s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 76132-76631 Capsella grandiflora
Cagra.0542s0021 1.0kb upstream 1.0kb upstream 3205 true Scaffold542: 76632-79836 Capsella grandiflora
Cagra.0542s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 78837-79836 Capsella grandiflora
Cagra.0542s0021 1.0kb downstream 1.0kb downstream 3205 true Scaffold542: 75632-78836 Capsella grandiflora
Cagra.0542s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 75632-76631 Capsella grandiflora
Cagra.0542s0021 2.0kb upstream 2.0kb upstream 4205 true Scaffold542: 76632-80836 Capsella grandiflora
Cagra.0542s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 78837-80836 Capsella grandiflora
Cagra.0542s0021 2.0kb downstream 2.0kb downstream 4205 true Scaffold542: 74632-78836 Capsella grandiflora
Cagra.0542s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 74632-76631 Capsella grandiflora
Cagra.0542s0021 5.0kb upstream 5.0kb upstream 7205 true Scaffold542: 76632-83836 Capsella grandiflora
Cagra.0542s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 78837-83836 Capsella grandiflora
Cagra.0542s0021 5.0kb downstream 5.0kb downstream 7205 true Scaffold542: 71632-78836 Capsella grandiflora
Cagra.0542s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 71632-76631 Capsella grandiflora
Cagra.0542s0021 10.0kb upstream 10.0kb upstream 12205 true Scaffold542: 76632-88836 Capsella grandiflora
Cagra.0542s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 78837-88836 Capsella grandiflora
Cagra.0542s0021 10.0kb downstream 10.0kb downstream 12205 true Scaffold542: 66632-78836 Capsella grandiflora
Cagra.0542s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 66632-76631 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360425 5261 Brassicaceae View MSA
123836621 5264 Brassicales-Malvales View MSA
124350878 5266 SBM View MSA
124246929 5268 Malvidae View MSA
124071102 5270 Rosid View MSA
123749282 5271 Pentapetalae View MSA
122787317 5272 Eudicot View MSA
122050189 5273 Angiosperm View MSA
121311789 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain