Gene : Cagra.0542s0022 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31471:SF8 - GB Genomic Order:  22
Name:  ? Cagra.0542s0022 Secondary Identifier:  ? PAC:28916802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0022 0.5kb upstream 0.5kb upstream 1870 true Scaffold542: 81011-82880 Capsella grandiflora
Cagra.0542s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 82381-82880 Capsella grandiflora
Cagra.0542s0022 0.5kb downstream 0.5kb downstream 1870 true Scaffold542: 80511-82380 Capsella grandiflora
Cagra.0542s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 80511-81010 Capsella grandiflora
Cagra.0542s0022 1.0kb upstream 1.0kb upstream 2370 true Scaffold542: 81011-83380 Capsella grandiflora
Cagra.0542s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 82381-83380 Capsella grandiflora
Cagra.0542s0022 1.0kb downstream 1.0kb downstream 2370 true Scaffold542: 80011-82380 Capsella grandiflora
Cagra.0542s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 80011-81010 Capsella grandiflora
Cagra.0542s0022 2.0kb upstream 2.0kb upstream 3370 true Scaffold542: 81011-84380 Capsella grandiflora
Cagra.0542s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 82381-84380 Capsella grandiflora
Cagra.0542s0022 2.0kb downstream 2.0kb downstream 3370 true Scaffold542: 79011-82380 Capsella grandiflora
Cagra.0542s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 79011-81010 Capsella grandiflora
Cagra.0542s0022 5.0kb upstream 5.0kb upstream 6370 true Scaffold542: 81011-87380 Capsella grandiflora
Cagra.0542s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 82381-87380 Capsella grandiflora
Cagra.0542s0022 5.0kb downstream 5.0kb downstream 6370 true Scaffold542: 76011-82380 Capsella grandiflora
Cagra.0542s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 76011-81010 Capsella grandiflora
Cagra.0542s0022 10.0kb upstream 10.0kb upstream 11370 true Scaffold542: 81011-92380 Capsella grandiflora
Cagra.0542s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 82381-92380 Capsella grandiflora
Cagra.0542s0022 10.0kb downstream 10.0kb downstream 11370 true Scaffold542: 71011-82380 Capsella grandiflora
Cagra.0542s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 71011-81010 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366523 5261 Brassicaceae View MSA
123836480 5264 Brassicales-Malvales View MSA
124345158 5266 SBM View MSA
124241041 5268 Malvidae View MSA
124067331 5270 Rosid View MSA
123743301 5271 Pentapetalae View MSA
122785962 5272 Eudicot View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain