Gene : Cagra.0542s0038 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10438:SF263 - THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC Genomic Order:  38
Name:  ? Cagra.0542s0038 Secondary Identifier:  ? PAC:28916764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0038 0.5kb upstream 0.5kb upstream 1924 true Scaffold542: 140497-142420 Capsella grandiflora
Cagra.0542s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 140497-140996 Capsella grandiflora
Cagra.0542s0038 0.5kb downstream 0.5kb downstream 1924 true Scaffold542: 140997-142920 Capsella grandiflora
Cagra.0542s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 142421-142920 Capsella grandiflora
Cagra.0542s0038 1.0kb upstream 1.0kb upstream 2424 true Scaffold542: 139997-142420 Capsella grandiflora
Cagra.0542s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 139997-140996 Capsella grandiflora
Cagra.0542s0038 1.0kb downstream 1.0kb downstream 2424 true Scaffold542: 140997-143420 Capsella grandiflora
Cagra.0542s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 142421-143420 Capsella grandiflora
Cagra.0542s0038 2.0kb upstream 2.0kb upstream 3424 true Scaffold542: 138997-142420 Capsella grandiflora
Cagra.0542s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 138997-140996 Capsella grandiflora
Cagra.0542s0038 2.0kb downstream 2.0kb downstream 3424 true Scaffold542: 140997-144420 Capsella grandiflora
Cagra.0542s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 142421-144420 Capsella grandiflora
Cagra.0542s0038 5.0kb upstream 5.0kb upstream 6424 true Scaffold542: 135997-142420 Capsella grandiflora
Cagra.0542s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 135997-140996 Capsella grandiflora
Cagra.0542s0038 5.0kb downstream 5.0kb downstream 6424 true Scaffold542: 140997-147420 Capsella grandiflora
Cagra.0542s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 142421-147420 Capsella grandiflora
Cagra.0542s0038 10.0kb upstream 10.0kb upstream 11424 true Scaffold542: 130997-142420 Capsella grandiflora
Cagra.0542s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 130997-140996 Capsella grandiflora
Cagra.0542s0038 10.0kb downstream 10.0kb downstream 11424 true Scaffold542: 140997-152420 Capsella grandiflora
Cagra.0542s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 142421-152420 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378976 5261 Brassicaceae View MSA
123837068 5264 Brassicales-Malvales View MSA
124348474 5266 SBM View MSA
124246746 5268 Malvidae View MSA
124069337 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain