Gene : Cagra.0542s0039 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33477:SF2 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  39
Name:  ? Cagra.0542s0039 Secondary Identifier:  ? PAC:28916803
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0542s0039 0.5kb upstream 0.5kb upstream 3451 true Scaffold542: 143579-147029 Capsella grandiflora
Cagra.0542s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold542: 146530-147029 Capsella grandiflora
Cagra.0542s0039 0.5kb downstream 0.5kb downstream 3451 true Scaffold542: 143079-146529 Capsella grandiflora
Cagra.0542s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold542: 143079-143578 Capsella grandiflora
Cagra.0542s0039 1.0kb upstream 1.0kb upstream 3951 true Scaffold542: 143579-147529 Capsella grandiflora
Cagra.0542s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold542: 146530-147529 Capsella grandiflora
Cagra.0542s0039 1.0kb downstream 1.0kb downstream 3951 true Scaffold542: 142579-146529 Capsella grandiflora
Cagra.0542s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold542: 142579-143578 Capsella grandiflora
Cagra.0542s0039 2.0kb upstream 2.0kb upstream 4951 true Scaffold542: 143579-148529 Capsella grandiflora
Cagra.0542s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold542: 146530-148529 Capsella grandiflora
Cagra.0542s0039 2.0kb downstream 2.0kb downstream 4951 true Scaffold542: 141579-146529 Capsella grandiflora
Cagra.0542s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold542: 141579-143578 Capsella grandiflora
Cagra.0542s0039 5.0kb upstream 5.0kb upstream 7951 true Scaffold542: 143579-151529 Capsella grandiflora
Cagra.0542s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold542: 146530-151529 Capsella grandiflora
Cagra.0542s0039 5.0kb downstream 5.0kb downstream 7951 true Scaffold542: 138579-146529 Capsella grandiflora
Cagra.0542s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold542: 138579-143578 Capsella grandiflora
Cagra.0542s0039 10.0kb upstream 10.0kb upstream 12951 true Scaffold542: 143579-156529 Capsella grandiflora
Cagra.0542s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold542: 146530-156529 Capsella grandiflora
Cagra.0542s0039 10.0kb downstream 10.0kb downstream 12951 true Scaffold542: 133579-146529 Capsella grandiflora
Cagra.0542s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold542: 133579-143578 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361961 5261 Brassicaceae View MSA
123837368 5264 Brassicales-Malvales View MSA
124341632 5266 SBM View MSA
124243632 5268 Malvidae View MSA
124065371 5270 Rosid View MSA
123736809 5271 Pentapetalae View MSA
122793373 5272 Eudicot View MSA
122047175 5273 Angiosperm View MSA
121349893 5274 Embryophyte View MSA
123424607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain