Gene : Cagra.0551s0009 C. grandiflora v1.1
Defline:  (1 of 2) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  9
Name:  ? Cagra.0551s0009 Secondary Identifier:  ? PAC:28898965
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-5690 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0009 0.5kb upstream 0.5kb upstream 4122 true Scaffold551: 27126-31247 Capsella grandiflora
Cagra.0551s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 27126-27625 Capsella grandiflora
Cagra.0551s0009 0.5kb downstream 0.5kb downstream 4122 true Scaffold551: 27626-31747 Capsella grandiflora
Cagra.0551s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 31248-31747 Capsella grandiflora
Cagra.0551s0009 1.0kb upstream 1.0kb upstream 4622 true Scaffold551: 26626-31247 Capsella grandiflora
Cagra.0551s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 26626-27625 Capsella grandiflora
Cagra.0551s0009 1.0kb downstream 1.0kb downstream 4622 true Scaffold551: 27626-32247 Capsella grandiflora
Cagra.0551s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 31248-32247 Capsella grandiflora
Cagra.0551s0009 2.0kb upstream 2.0kb upstream 5622 true Scaffold551: 25626-31247 Capsella grandiflora
Cagra.0551s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 25626-27625 Capsella grandiflora
Cagra.0551s0009 2.0kb downstream 2.0kb downstream 5622 true Scaffold551: 27626-33247 Capsella grandiflora
Cagra.0551s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 31248-33247 Capsella grandiflora
Cagra.0551s0009 5.0kb upstream 5.0kb upstream 8622 true Scaffold551: 22626-31247 Capsella grandiflora
Cagra.0551s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 22626-27625 Capsella grandiflora
Cagra.0551s0009 5.0kb downstream 5.0kb downstream 8622 true Scaffold551: 27626-36247 Capsella grandiflora
Cagra.0551s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold551: 31248-36247 Capsella grandiflora
Cagra.0551s0009 10.0kb upstream 10.0kb upstream 13622 true Scaffold551: 17626-31247 Capsella grandiflora
Cagra.0551s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 17626-27625 Capsella grandiflora
Cagra.0551s0009 10.0kb downstream 10.0kb downstream 13622 true Scaffold551: 27626-41247 Capsella grandiflora
Cagra.0551s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold551: 31248-41247 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373971 5261 Brassicaceae View MSA
123829006 5264 Brassicales-Malvales View MSA
124336503 5266 SBM View MSA
124247146 5268 Malvidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain