Gene : Cagra.0551s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12802:SF2 - SWI/SNF COMPLEX SUBUNIT SWI3A Genomic Order:  19
Name:  ? Cagra.0551s0019 Secondary Identifier:  ? PAC:28898976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0019 0.5kb upstream 0.5kb upstream 2977 true Scaffold551: 57296-60272 Capsella grandiflora
Cagra.0551s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 57296-57795 Capsella grandiflora
Cagra.0551s0019 0.5kb downstream 0.5kb downstream 2977 true Scaffold551: 57796-60772 Capsella grandiflora
Cagra.0551s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 60273-60772 Capsella grandiflora
Cagra.0551s0019 1.0kb upstream 1.0kb upstream 3477 true Scaffold551: 56796-60272 Capsella grandiflora
Cagra.0551s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 56796-57795 Capsella grandiflora
Cagra.0551s0019 1.0kb downstream 1.0kb downstream 3477 true Scaffold551: 57796-61272 Capsella grandiflora
Cagra.0551s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 60273-61272 Capsella grandiflora
Cagra.0551s0019 2.0kb upstream 2.0kb upstream 4477 true Scaffold551: 55796-60272 Capsella grandiflora
Cagra.0551s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 55796-57795 Capsella grandiflora
Cagra.0551s0019 2.0kb downstream 2.0kb downstream 4477 true Scaffold551: 57796-62272 Capsella grandiflora
Cagra.0551s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 60273-62272 Capsella grandiflora
Cagra.0551s0019 5.0kb upstream 5.0kb upstream 7477 true Scaffold551: 52796-60272 Capsella grandiflora
Cagra.0551s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 52796-57795 Capsella grandiflora
Cagra.0551s0019 5.0kb downstream 5.0kb downstream 7477 true Scaffold551: 57796-65272 Capsella grandiflora
Cagra.0551s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold551: 60273-65272 Capsella grandiflora
Cagra.0551s0019 10.0kb upstream 10.0kb upstream 12477 true Scaffold551: 47796-60272 Capsella grandiflora
Cagra.0551s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 47796-57795 Capsella grandiflora
Cagra.0551s0019 10.0kb downstream 10.0kb downstream 12477 true Scaffold551: 57796-70272 Capsella grandiflora
Cagra.0551s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold551: 60273-70272 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370300 5261 Brassicaceae View MSA
123827472 5264 Brassicales-Malvales View MSA
124344198 5266 SBM View MSA
124244401 5268 Malvidae View MSA
124065857 5270 Rosid View MSA
123740148 5271 Pentapetalae View MSA
122792229 5272 Eudicot View MSA
122044148 5273 Angiosperm View MSA
121349753 5274 Embryophyte View MSA
123381428 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain