Gene : Cagra.0551s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33470:SF1 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  11
Name:  ? Cagra.0551s0011 Secondary Identifier:  ? PAC:28898985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0011 0.5kb upstream 0.5kb upstream 1350 true Scaffold551: 32654-34003 Capsella grandiflora
Cagra.0551s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 32654-33153 Capsella grandiflora
Cagra.0551s0011 0.5kb downstream 0.5kb downstream 1350 true Scaffold551: 33154-34503 Capsella grandiflora
Cagra.0551s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 34004-34503 Capsella grandiflora
Cagra.0551s0011 1.0kb upstream 1.0kb upstream 1850 true Scaffold551: 32154-34003 Capsella grandiflora
Cagra.0551s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 32154-33153 Capsella grandiflora
Cagra.0551s0011 1.0kb downstream 1.0kb downstream 1850 true Scaffold551: 33154-35003 Capsella grandiflora
Cagra.0551s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 34004-35003 Capsella grandiflora
Cagra.0551s0011 2.0kb upstream 2.0kb upstream 2850 true Scaffold551: 31154-34003 Capsella grandiflora
Cagra.0551s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 31154-33153 Capsella grandiflora
Cagra.0551s0011 2.0kb downstream 2.0kb downstream 2850 true Scaffold551: 33154-36003 Capsella grandiflora
Cagra.0551s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 34004-36003 Capsella grandiflora
Cagra.0551s0011 5.0kb upstream 5.0kb upstream 5850 true Scaffold551: 28154-34003 Capsella grandiflora
Cagra.0551s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 28154-33153 Capsella grandiflora
Cagra.0551s0011 5.0kb downstream 5.0kb downstream 5850 true Scaffold551: 33154-39003 Capsella grandiflora
Cagra.0551s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold551: 34004-39003 Capsella grandiflora
Cagra.0551s0011 10.0kb upstream 10.0kb upstream 10850 true Scaffold551: 23154-34003 Capsella grandiflora
Cagra.0551s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 23154-33153 Capsella grandiflora
Cagra.0551s0011 10.0kb downstream 10.0kb downstream 10850 true Scaffold551: 33154-44003 Capsella grandiflora
Cagra.0551s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold551: 34004-44003 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365056 5261 Brassicaceae View MSA
123798883 5264 Brassicales-Malvales View MSA
124296461 5266 SBM View MSA
124254675 5268 Malvidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain