Gene : Cagra.0551s0012 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33470:SF1 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  12
Name:  ? Cagra.0551s0012 Secondary Identifier:  ? PAC:28898966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0012 0.5kb upstream 0.5kb upstream 1139 true Scaffold551: 34537-35675 Capsella grandiflora
Cagra.0551s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 34537-35036 Capsella grandiflora
Cagra.0551s0012 0.5kb downstream 0.5kb downstream 1139 true Scaffold551: 35037-36175 Capsella grandiflora
Cagra.0551s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 35676-36175 Capsella grandiflora
Cagra.0551s0012 1.0kb upstream 1.0kb upstream 1639 true Scaffold551: 34037-35675 Capsella grandiflora
Cagra.0551s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 34037-35036 Capsella grandiflora
Cagra.0551s0012 1.0kb downstream 1.0kb downstream 1639 true Scaffold551: 35037-36675 Capsella grandiflora
Cagra.0551s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 35676-36675 Capsella grandiflora
Cagra.0551s0012 2.0kb upstream 2.0kb upstream 2639 true Scaffold551: 33037-35675 Capsella grandiflora
Cagra.0551s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 33037-35036 Capsella grandiflora
Cagra.0551s0012 2.0kb downstream 2.0kb downstream 2639 true Scaffold551: 35037-37675 Capsella grandiflora
Cagra.0551s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 35676-37675 Capsella grandiflora
Cagra.0551s0012 5.0kb upstream 5.0kb upstream 5639 true Scaffold551: 30037-35675 Capsella grandiflora
Cagra.0551s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 30037-35036 Capsella grandiflora
Cagra.0551s0012 5.0kb downstream 5.0kb downstream 5639 true Scaffold551: 35037-40675 Capsella grandiflora
Cagra.0551s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold551: 35676-40675 Capsella grandiflora
Cagra.0551s0012 10.0kb upstream 10.0kb upstream 10639 true Scaffold551: 25037-35675 Capsella grandiflora
Cagra.0551s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 25037-35036 Capsella grandiflora
Cagra.0551s0012 10.0kb downstream 10.0kb downstream 10639 true Scaffold551: 35037-45675 Capsella grandiflora
Cagra.0551s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold551: 35676-45675 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377710 5261 Brassicaceae View MSA
123839777 5264 Brassicales-Malvales View MSA
124350149 5266 SBM View MSA
124237056 5268 Malvidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain