Gene : Cagra.0551s0034 C. grandiflora v1.1
Defline:  (1 of 1) KOG1188 - WD40 repeat protein Genomic Order:  34
Name:  ? Cagra.0551s0034 Secondary Identifier:  ? PAC:28898969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0551s0034 0.5kb upstream 0.5kb upstream 2529 true Scaffold551: 99028-101556 Capsella grandiflora
Cagra.0551s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold551: 101057-101556 Capsella grandiflora
Cagra.0551s0034 0.5kb downstream 0.5kb downstream 2529 true Scaffold551: 98528-101056 Capsella grandiflora
Cagra.0551s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold551: 98528-99027 Capsella grandiflora
Cagra.0551s0034 1.0kb upstream 1.0kb upstream 3029 true Scaffold551: 99028-102056 Capsella grandiflora
Cagra.0551s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold551: 101057-102056 Capsella grandiflora
Cagra.0551s0034 1.0kb downstream 1.0kb downstream 3029 true Scaffold551: 98028-101056 Capsella grandiflora
Cagra.0551s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold551: 98028-99027 Capsella grandiflora
Cagra.0551s0034 2.0kb upstream 2.0kb upstream 4029 true Scaffold551: 99028-103056 Capsella grandiflora
Cagra.0551s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold551: 101057-103056 Capsella grandiflora
Cagra.0551s0034 2.0kb downstream 2.0kb downstream 4029 true Scaffold551: 97028-101056 Capsella grandiflora
Cagra.0551s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold551: 97028-99027 Capsella grandiflora
Cagra.0551s0034 5.0kb upstream 5.0kb upstream 7029 true Scaffold551: 99028-106056 Capsella grandiflora
Cagra.0551s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold551: 101057-106056 Capsella grandiflora
Cagra.0551s0034 5.0kb downstream 5.0kb downstream 7029 true Scaffold551: 94028-101056 Capsella grandiflora
Cagra.0551s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold551: 94028-99027 Capsella grandiflora
Cagra.0551s0034 10.0kb upstream 10.0kb upstream 12029 true Scaffold551: 99028-111056 Capsella grandiflora
Cagra.0551s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold551: 101057-111056 Capsella grandiflora
Cagra.0551s0034 10.0kb downstream 10.0kb downstream 12029 true Scaffold551: 89028-101056 Capsella grandiflora
Cagra.0551s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold551: 89028-99027 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367462 5261 Brassicaceae View MSA
123834730 5264 Brassicales-Malvales View MSA
124343519 5266 SBM View MSA
124240314 5268 Malvidae View MSA
124068228 5270 Rosid View MSA
123738584 5271 Pentapetalae View MSA
122788680 5272 Eudicot View MSA
122044076 5273 Angiosperm View MSA
121344334 5274 Embryophyte View MSA
123425104 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain