Gene : Cagra.0534s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19432:SF27 - SUCROSE TRANSPORT PROTEIN SUC3 Genomic Order:  21
Name:  ? Cagra.0534s0021 Secondary Identifier:  ? PAC:28907688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0534s0021 0.5kb upstream 0.5kb upstream 4532 true Scaffold534: 89510-94041 Capsella grandiflora
Cagra.0534s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold534: 89510-90009 Capsella grandiflora
Cagra.0534s0021 0.5kb downstream 0.5kb downstream 4532 true Scaffold534: 90010-94541 Capsella grandiflora
Cagra.0534s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold534: 94042-94541 Capsella grandiflora
Cagra.0534s0021 1.0kb upstream 1.0kb upstream 5032 true Scaffold534: 89010-94041 Capsella grandiflora
Cagra.0534s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold534: 89010-90009 Capsella grandiflora
Cagra.0534s0021 1.0kb downstream 1.0kb downstream 5032 true Scaffold534: 90010-95041 Capsella grandiflora
Cagra.0534s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold534: 94042-95041 Capsella grandiflora
Cagra.0534s0021 2.0kb upstream 2.0kb upstream 6032 true Scaffold534: 88010-94041 Capsella grandiflora
Cagra.0534s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold534: 88010-90009 Capsella grandiflora
Cagra.0534s0021 2.0kb downstream 2.0kb downstream 6032 true Scaffold534: 90010-96041 Capsella grandiflora
Cagra.0534s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold534: 94042-96041 Capsella grandiflora
Cagra.0534s0021 5.0kb upstream 5.0kb upstream 9032 true Scaffold534: 85010-94041 Capsella grandiflora
Cagra.0534s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold534: 85010-90009 Capsella grandiflora
Cagra.0534s0021 5.0kb downstream 5.0kb downstream 9032 true Scaffold534: 90010-99041 Capsella grandiflora
Cagra.0534s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold534: 94042-99041 Capsella grandiflora
Cagra.0534s0021 10.0kb upstream 10.0kb upstream 14032 true Scaffold534: 80010-94041 Capsella grandiflora
Cagra.0534s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold534: 80010-90009 Capsella grandiflora
Cagra.0534s0021 10.0kb downstream 10.0kb downstream 14032 true Scaffold534: 90010-104041 Capsella grandiflora
Cagra.0534s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold534: 94042-104041 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373835 5261 Brassicaceae View MSA
123835949 5264 Brassicales-Malvales View MSA
124338153 5266 SBM View MSA
124241784 5268 Malvidae View MSA
124060733 5270 Rosid View MSA
123738765 5271 Pentapetalae View MSA
122787813 5272 Eudicot View MSA
122042512 5273 Angiosperm View MSA
121351418 5274 Embryophyte View MSA
123382158 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain