Gene : Cagra.0534s0031 C. grandiflora v1.1
Defline:  (1 of 5) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  31
Name:  ? Cagra.0534s0031 Secondary Identifier:  ? PAC:28907679
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0534s0031 0.5kb upstream 0.5kb upstream 3425 true Scaffold534: 136610-140034 Capsella grandiflora
Cagra.0534s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold534: 136610-137109 Capsella grandiflora
Cagra.0534s0031 0.5kb downstream 0.5kb downstream 3425 true Scaffold534: 137110-140534 Capsella grandiflora
Cagra.0534s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold534: 140035-140534 Capsella grandiflora
Cagra.0534s0031 1.0kb upstream 1.0kb upstream 3925 true Scaffold534: 136110-140034 Capsella grandiflora
Cagra.0534s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold534: 136110-137109 Capsella grandiflora
Cagra.0534s0031 1.0kb downstream 1.0kb downstream 3925 true Scaffold534: 137110-141034 Capsella grandiflora
Cagra.0534s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold534: 140035-141034 Capsella grandiflora
Cagra.0534s0031 2.0kb upstream 2.0kb upstream 4925 true Scaffold534: 135110-140034 Capsella grandiflora
Cagra.0534s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold534: 135110-137109 Capsella grandiflora
Cagra.0534s0031 2.0kb downstream 2.0kb downstream 4925 true Scaffold534: 137110-142034 Capsella grandiflora
Cagra.0534s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold534: 140035-142034 Capsella grandiflora
Cagra.0534s0031 5.0kb upstream 5.0kb upstream 7925 true Scaffold534: 132110-140034 Capsella grandiflora
Cagra.0534s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold534: 132110-137109 Capsella grandiflora
Cagra.0534s0031 5.0kb downstream 5.0kb downstream 7925 true Scaffold534: 137110-145034 Capsella grandiflora
Cagra.0534s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold534: 140035-145034 Capsella grandiflora
Cagra.0534s0031 10.0kb upstream 10.0kb upstream 12925 true Scaffold534: 127110-140034 Capsella grandiflora
Cagra.0534s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold534: 127110-137109 Capsella grandiflora
Cagra.0534s0031 10.0kb downstream 10.0kb downstream 12925 true Scaffold534: 137110-150034 Capsella grandiflora
Cagra.0534s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold534: 140035-150034 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371378 5261 Brassicaceae View MSA
123838361 5264 Brassicales-Malvales View MSA
124339218 5266 SBM View MSA
124245253 5268 Malvidae View MSA
124066515 5270 Rosid View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain