Gene : Cagra.0534s0038 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12696 - TIP120 Genomic Order:  38
Name:  ? Cagra.0534s0038 Secondary Identifier:  ? PAC:28907668
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0534s0038 0.5kb upstream 0.5kb upstream 8106 true Scaffold534: 168442-176547 Capsella grandiflora
Cagra.0534s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold534: 176048-176547 Capsella grandiflora
Cagra.0534s0038 0.5kb downstream 0.5kb downstream 8106 true Scaffold534: 167942-176047 Capsella grandiflora
Cagra.0534s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold534: 167942-168441 Capsella grandiflora
Cagra.0534s0038 1.0kb upstream 1.0kb upstream 8606 true Scaffold534: 168442-177047 Capsella grandiflora
Cagra.0534s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold534: 176048-177047 Capsella grandiflora
Cagra.0534s0038 1.0kb downstream 1.0kb downstream 8606 true Scaffold534: 167442-176047 Capsella grandiflora
Cagra.0534s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold534: 167442-168441 Capsella grandiflora
Cagra.0534s0038 2.0kb upstream 2.0kb upstream 9606 true Scaffold534: 168442-178047 Capsella grandiflora
Cagra.0534s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold534: 176048-178047 Capsella grandiflora
Cagra.0534s0038 2.0kb downstream 2.0kb downstream 9606 true Scaffold534: 166442-176047 Capsella grandiflora
Cagra.0534s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold534: 166442-168441 Capsella grandiflora
Cagra.0534s0038 5.0kb upstream 5.0kb upstream 12606 true Scaffold534: 168442-181047 Capsella grandiflora
Cagra.0534s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold534: 176048-181047 Capsella grandiflora
Cagra.0534s0038 5.0kb downstream 5.0kb downstream 12606 true Scaffold534: 163442-176047 Capsella grandiflora
Cagra.0534s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold534: 163442-168441 Capsella grandiflora
Cagra.0534s0038 10.0kb upstream 10.0kb upstream 17606 true Scaffold534: 168442-186047 Capsella grandiflora
Cagra.0534s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold534: 176048-186047 Capsella grandiflora
Cagra.0534s0038 10.0kb downstream 10.0kb downstream 17606 true Scaffold534: 158442-176047 Capsella grandiflora
Cagra.0534s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold534: 158442-168441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377124 5261 Brassicaceae View MSA
123839849 5264 Brassicales-Malvales View MSA
124338876 5266 SBM View MSA
124250637 5268 Malvidae View MSA
124064777 5270 Rosid View MSA
123736693 5271 Pentapetalae View MSA
122792055 5272 Eudicot View MSA
122049783 5273 Angiosperm View MSA
121344585 5274 Embryophyte View MSA
123423876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain