Gene : Cagra.0534s0040 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15082 - NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT Genomic Order:  40
Name:  ? Cagra.0534s0040 Secondary Identifier:  ? PAC:28907656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0534s0040 0.5kb upstream 0.5kb upstream 1855 true Scaffold534: 183247-185101 Capsella grandiflora
Cagra.0534s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold534: 184602-185101 Capsella grandiflora
Cagra.0534s0040 0.5kb downstream 0.5kb downstream 1855 true Scaffold534: 182747-184601 Capsella grandiflora
Cagra.0534s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold534: 182747-183246 Capsella grandiflora
Cagra.0534s0040 1.0kb upstream 1.0kb upstream 2355 true Scaffold534: 183247-185601 Capsella grandiflora
Cagra.0534s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold534: 184602-185601 Capsella grandiflora
Cagra.0534s0040 1.0kb downstream 1.0kb downstream 2355 true Scaffold534: 182247-184601 Capsella grandiflora
Cagra.0534s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold534: 182247-183246 Capsella grandiflora
Cagra.0534s0040 2.0kb upstream 2.0kb upstream 3355 true Scaffold534: 183247-186601 Capsella grandiflora
Cagra.0534s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold534: 184602-186601 Capsella grandiflora
Cagra.0534s0040 2.0kb downstream 2.0kb downstream 3355 true Scaffold534: 181247-184601 Capsella grandiflora
Cagra.0534s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold534: 181247-183246 Capsella grandiflora
Cagra.0534s0040 5.0kb upstream 5.0kb upstream 6355 true Scaffold534: 183247-189601 Capsella grandiflora
Cagra.0534s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold534: 184602-189601 Capsella grandiflora
Cagra.0534s0040 5.0kb downstream 5.0kb downstream 6355 true Scaffold534: 178247-184601 Capsella grandiflora
Cagra.0534s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold534: 178247-183246 Capsella grandiflora
Cagra.0534s0040 10.0kb upstream 10.0kb upstream 11355 true Scaffold534: 183247-194601 Capsella grandiflora
Cagra.0534s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold534: 184602-194601 Capsella grandiflora
Cagra.0534s0040 10.0kb downstream 10.0kb downstream 11355 true Scaffold534: 173247-184601 Capsella grandiflora
Cagra.0534s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold534: 173247-183246 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041378 5273 Angiosperm View MSA
122364412 5261 Brassicaceae View MSA
123837693 5264 Brassicales-Malvales View MSA
124347616 5266 SBM View MSA
124236931 5268 Malvidae View MSA
124066419 5270 Rosid View MSA
123739087 5271 Pentapetalae View MSA
122791679 5272 Eudicot View MSA
121347471 5274 Embryophyte View MSA
123380558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain