Gene : Cagra.0534s0044 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11669:SF0 - PROTEIN STICHEL-RELATED Genomic Order:  44
Name:  ? Cagra.0534s0044 Secondary Identifier:  ? PAC:28907648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0534s0044 0.5kb upstream 0.5kb upstream 5290 true Scaffold534: 190929-196218 Capsella grandiflora
Cagra.0534s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold534: 195719-196218 Capsella grandiflora
Cagra.0534s0044 0.5kb downstream 0.5kb downstream 5290 true Scaffold534: 190429-195718 Capsella grandiflora
Cagra.0534s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold534: 190429-190928 Capsella grandiflora
Cagra.0534s0044 1.0kb upstream 1.0kb upstream 5790 true Scaffold534: 190929-196718 Capsella grandiflora
Cagra.0534s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold534: 195719-196718 Capsella grandiflora
Cagra.0534s0044 1.0kb downstream 1.0kb downstream 5790 true Scaffold534: 189929-195718 Capsella grandiflora
Cagra.0534s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold534: 189929-190928 Capsella grandiflora
Cagra.0534s0044 2.0kb upstream 2.0kb upstream 6790 true Scaffold534: 190929-197718 Capsella grandiflora
Cagra.0534s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold534: 195719-197718 Capsella grandiflora
Cagra.0534s0044 2.0kb downstream 2.0kb downstream 6790 true Scaffold534: 188929-195718 Capsella grandiflora
Cagra.0534s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold534: 188929-190928 Capsella grandiflora
Cagra.0534s0044 5.0kb upstream 5.0kb upstream 9790 true Scaffold534: 190929-200718 Capsella grandiflora
Cagra.0534s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold534: 195719-200718 Capsella grandiflora
Cagra.0534s0044 5.0kb downstream 5.0kb downstream 9790 true Scaffold534: 185929-195718 Capsella grandiflora
Cagra.0534s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold534: 185929-190928 Capsella grandiflora
Cagra.0534s0044 10.0kb upstream 10.0kb upstream 14790 true Scaffold534: 190929-205718 Capsella grandiflora
Cagra.0534s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold534: 195719-205718 Capsella grandiflora
Cagra.0534s0044 10.0kb downstream 10.0kb downstream 14790 true Scaffold534: 180929-195718 Capsella grandiflora
Cagra.0534s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold534: 180929-190928 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364888 5261 Brassicaceae View MSA
123836544 5264 Brassicales-Malvales View MSA
124345329 5266 SBM View MSA
124241247 5268 Malvidae View MSA
124067444 5270 Rosid View MSA
123746240 5271 Pentapetalae View MSA
122793497 5272 Eudicot View MSA
122045502 5273 Angiosperm View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain